Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq4563 154 2e-32 >seq4563 Length=14502029 Score = 154 bits (170), Expect = 2e-32 Identities = 303/443 (68%), Gaps = 4/443 (1%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || || ||| |||||| |||||||| ||||| ||||||| ||| ||||||| Sbjct 3739881 GTACTCGCCCACCTTCTTCTCAAAGAAGTTCGTCTTTCCGTCCAGCGAGATCATCTCCAT 3739822 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCA-ATCTGTTTGAGGAGAC 125876 || | ||| |||||||| | || | ||| ||| || | | | || || || | Sbjct 3739821 GAAGTTAAAGGGGTTCTTGGTATTGTAGATT-TTGCCAACGCTCAACTCCACCAGCAGTC 3739763 Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 125936 | |||| ||| | |||||||||| ||||| || ||||||| ||||||||||| Sbjct 3739762 GGTCCGCCACGAATTCAATGTACTGCGACATAAGATCGCAGTTCATGCCGATGAGGTTTA 3739703 Query 125937 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGT 125996 || | || || | |||| ||| |||||| |||| || || || | ||| || Sbjct 3739702 CGGGCAAGGCATCGGTTAAGAACTCCTGCTCAATGGCCACCGCATCGCGGATGATCTCGA 3739643 Query 125997 GAATGGTGTCCACCCCAGGTCTATTGCGCAAAGT-CTTGAAGAGTTCCACGGCAAACTCT 126055 ||| || || |||| ||| | |||| || ||| | ||||||||| || Sbjct 3739642 TGATGCGCTCGCGCCTGGGTC-GCTGCACCAAGTGCTGGAACATCAGCACGGCAAAGTCG 3739584 Query 126056 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGA 126115 || | |||||||| |||||||| || || || |||||| |||||| ||||| ||| Sbjct 3739583 CAATGCAAGCCCTCGTCGCGGGAGATAAGCTCGTTGGAGAAGGTCAGTCCCGGCATCAGA 3739524 Query 126116 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACA 126175 || |||||||||| ||||||||| | ||| || ||||||||| ||||| || Sbjct 3739523 CCGCGCTTCTTCAGCCAGAAAATGGAGGCAAAGCTGCCGCTGAAGAAGATGCCCTCGACG 3739464 Query 126176 CACGCGAACGCAAAGAGACGCTC 126198 ||||| |||| || ||||| Sbjct 3739463 GCAGCGAAGGCAATGATGCGCTC 3739441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597288787134400