Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq1 205 9e-48
>seq1
Length=22559587
Score = 205 bits (226), Expect = 9e-48
Identities = 868/1363 (64%), Gaps = 35/1363 (3%)
Strand=Plus/Minus
Query 93928 CCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTC 93987
|| ||| |||| || || ||||| |||| | | ||||||||| ||| || |||||
Sbjct 20043209 CCGCAGCTGTCGTCTTGCTTCCTCTTGACCATGACGGCCGACTCTATCGAGGGCATTTTT 20043150
Query 93988 GACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTC 94047
| | | | | ||||| ||||| |||| || || || || || | | |||
Sbjct 20043149 AAGTCCGTGGAACAGTGTGCCTTGATCTCGAAATCGGCCGGCGGCATTGGACTTAACGTC 20043090
Query 94048 CACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTC 94107
|| | | || || | ||| ||| || |||| || |||||||| ||||| ||| |
Sbjct 20043089 CATTGCATCCGGGCAAAGGGCACCTCGATTTGCGGAACGAATGGCACATCCAATGGCTTG 20043030
Query 94108 GTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGG 94167
|| || ||| | ||||||||||||| | |||||| || ||||| || || ||||| | |
Sbjct 20043029 GTTCCCATGTTGAGGGTCTTCAACAATGTGGCGCGTTATGTGGATCAAGGAGGTGGCAAG 20042970
Query 94168 AGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATC 94227
| ||| | || || | || || |||||||||||| |||| || | ||| |
Sbjct 20042969 CGTCCCGGTGCCTTTGCCATTTACCTGGAGCCCTGGCACTCGGATGTCTTTGAGTTCCTG 20042910
Query 94228 GACCTGCGAAAGAACCACGGCAACGATCTGGAGA---GGGCCAGAGACCTCTTCTACGCT 94284
|| || || ||| |||||| || ||| | ||||| | || || || |||||
Sbjct 20042909 GAACTTAAGAAAAACACCGGCAAGGA---GGAAAATCGGGCCCGCGATCTGTTTTACGCC 20042853
Query 94285 CTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTT 94344
|| ||| | || || || |||||||| ||||||||| || | ||| || |
Sbjct 20042852 CTGTGGATACCCGATCTCTTTATGAAGCGCGTCGAGGCCAATGGAGATTGGTCGCTAATG 20042793
Query 94345 TGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTAT 94404
|| || || |||| || || || ||| || || || || ||| | ||||||
Sbjct 20042792 TGCCCACATAAATGCCCTGGGCTTCACGATGTGTGGGGCGATGAATTCGAAAAGTTGTAT 20042733
Query 94405 GCTCGTTACGAATCGCAGGGCAAGGC---CAGGAAGGTTATGGATGCTAGGAAGCTGTGG 94461
| || || |||| || ||| | |||| | ||| ||||||
Sbjct 20042732 GAGAAATATGAGCAAGAGGGTCGTGCCAACAGAACTGTTA---AGGCTCAATCCCTGTGG 20042676
Query 94462 GATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCT 94521
| || | || | |||||| || || || | |||||||| ||||| ||||| |
Sbjct 20042675 TTTGCCATTATTGAAGCACAGGTCGAAACTGGAAACCCCTACATGTTGTTTAAGGATGCC 20042616
Query 94522 GTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACC 94581
|||| ||| |||||||||| | |||| |||||| | ||| |||||||
Sbjct 20042615 TGCAACAGGAAGAGCAACCAGCAGAATGTCGGCACCATCAAGTGTAGCAATTTGTGCACA 20042556
Query 94582 GAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAAC 94641
|| || || |||||| | ||||||| |||||||| || || ||| ||| |||||| |
Sbjct 20042555 GAAATCGTAGAGTATTCCGCTCCGGATGAGATTGCAGTTTGCAACTTGGCATCCATCGCC 20042496
Query 94642 CTGTCCACTTTCGTGCGAGATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTT 94701
|| || || || | || | | | | | |||| | || | |||
Sbjct 20042495 CTCAACATGTTTGT---CACTCCCGAGAAG---------ACATACGATTTCAAGAAACTT 20042448
Query 94702 -GTGAACTTCGCGGGAAGGATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTA 94760
||| || | || || | | ||| || |||| | ||||||| | ||||||||
Sbjct 20042447 AAGGAAGTTACCAAGACGG-TTACCAAGAATCTTAACAAGATAATCGATATTAACTTCTA 20042389
Query 94761 CCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCA 94820
|||| | || ||||| |||| || || ||| |||||| ||| | |||||||| |||||
Sbjct 20042388 CCCCCTGCCAGAGGCCAAGAAATCCAATTTGAGGCATCGTCCCGTGGGCATCGGTGTCCA 20042329
Query 94821 GGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGG 94880
||| ||||| ||||| || | | ||||| | ||||| || || || || |
Sbjct 20042328 GGGATTCGCTGACGCCTTGATTCTCATGCGGTTCCCCTATGAAAGTGATGAAGCCGGCCT 20042269
Query 94881 TTTGAATTTGAACATATTCGAAAGCATTTATTACGGGGCCAT-GAAACAATCCGTCCACT 94939
|||||| | | || ||||||| || || ||||| || | ||| | | || |||
Sbjct 20042268 CTTGAATCAGCAGATTTTCGAAACTATCTACTACGGCGCTTTGGAAGCCAGTTGTGAACT 20042209
Query 94940 TGGCCAGATCGGACGGCGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCA 94999
| |||||||| | || ||| | ||| | | ||| ||| || | || |
Sbjct 20042208 GGCCCAGATCGAA----GGTCCATATGAAACCTATGAGGGAAGCCCCGTGAGCAAAGGAA 20042153
Query 95000 TTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGG--GAAGCTCT 95057
|| | |||| |||| | |||| |||| || || | |||||| ||| ||
Sbjct 20042152 TTCTGCAGTACGACATGTGGGACAAAGAGCCAACGAACCTTTGGGACTGGCAGAAACTGA 20042093
Query 95058 ACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCAC 95117
| | | | | | || |||||||| ||| | ||| | || || || ||||||||
Sbjct 20042092 AGGAGTCCA--TCAAGAAGCACGGTGTCCGGAACTCCCTGTTGGTTGCTCCTATGCCCAC 20042035
Query 95118 GGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGT 95177
|| || || || || || | || |||||||| || ||||| || | ||| | || |
Sbjct 20042034 TGCTTCTACTGCTCAAATTATGGGTAACAACGAATCATTCGAGCCTTACACAACGAATAT 20041975
Query 95178 GTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGA 95237
|| | |||||| || || | || ||||||| || | ||| | || | || ||||
Sbjct 20041974 TTATACCAGGCGAGTTCTGTCTGGAGAATTCCAAGTGGTTAACCATCATTTGTTAAGGGA 20041915
Query 95238 CCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAA 95280
||| ||| |||| |||||| ||| | | |||||||||
Sbjct 20041914 CCTAACGGAGCTGGACTTGTGGGACGACGATATGAAGAACCAA 20041872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494669522532800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |