Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_011335.1
Length=119343
Score E
Sequences producing significant alignments: (Bits) Value
seq8012 100 2e-16
seq1354 93.3 3e-14
seq6851 84.2 2e-11
>seq8012
Length=346389
Score = 100 bits (110), Expect = 2e-16
Identities = 163/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 108355 ACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCCACCGCCCCGTTCAGG 108414
|||||||| || ||||| ||||| | ||||| ||||||||||||| ||| | |
Sbjct 160653 ACGGCCGGAGTGCATCGTCTGTGGTCGCACAAGGCCTACAAGGCCAAGCTGCCGCTGCGC 160712
Query 108415 GTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATCCCGCAGTGGGTGCTC 108474
| ||| || ||| ||| ||| |||| ||||||| |||| | ||||| |
Sbjct 160713 ATCTTCTTGATGCTGTGCCAGTCGCTGGCCTTCCAGAACAGCATCTGGGAGTGGACCCGT 160772
Query 108475 GATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAACGCCAACAGG 108534
|| ||| | || |||||||||| | | ||||| ||||| || |||||| || | |
Sbjct 160773 GACCACCGTGTGCACCACAAGTTCACCGACACACACGCCGATCCCCACAACTCCCGCCGC 160832
Query 108535 GGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGACGTGA 108589
|| |||| ||| | ||| |||| ||||| ||| | ||| ||||||| ||||
Sbjct 160833 GGCTTCTTCTTCGCCCACATGGGCTGGCTGATGTGCAAGAAGCACCCCGATGTGA 160887
>seq1354
Length=344
Score = 93.3 bits (102), Expect = 3e-14
Identities = 74/89 (83%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 108862 AACAAATTGGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTC 108921
||||| ||||| | | ||| | ||||||||||||||||||||||||||||||| |||
Sbjct 122 AACAAGCTGGTGTCCACCTTGACCATCGGCGAGGGATGGCACAACTACCACCACGTCTTC 63
Query 108922 CCCTACGACTACAAGGCCGCCGAGTTGGG 108950
|||| ||||||||||| || ||| ||||
Sbjct 62 CCCTGGGACTACAAGGCAGCTGAGCTGGG 34
>seq6851
Length=104827
Score = 84.2 bits (92), Expect = 2e-11
Identities = 74/92 (80%), Gaps = 3/92 (3%)
Strand=Plus/Minus
Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940
|||| |||||||||| ||||| |||||||||||||| ||||||| ||||||||| | |
Sbjct 63440 TGGCCTTCGGCGAGGGGTGGCATAACTACCACCACGTCTTCCCCTGGGACTACAAGACGG 63381
Query 108941 CCGAGTTGGGGAACGACT---TTAATTTCACC 108969
||||||| || || ||| | || ||||||
Sbjct 63380 CCGAGTTCGGCAAATACTCGCTAAACTTCACC 63349
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381732413209920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |