Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq8012 100 2e-16 seq1354 93.3 3e-14 seq6851 84.2 2e-11 >seq8012 Length=346389 Score = 100 bits (110), Expect = 2e-16 Identities = 163/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 108355 ACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCCACCGCCCCGTTCAGG 108414 |||||||| || ||||| ||||| | ||||| ||||||||||||| ||| | | Sbjct 160653 ACGGCCGGAGTGCATCGTCTGTGGTCGCACAAGGCCTACAAGGCCAAGCTGCCGCTGCGC 160712 Query 108415 GTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATCCCGCAGTGGGTGCTC 108474 | ||| || ||| ||| ||| |||| ||||||| |||| | ||||| | Sbjct 160713 ATCTTCTTGATGCTGTGCCAGTCGCTGGCCTTCCAGAACAGCATCTGGGAGTGGACCCGT 160772 Query 108475 GATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAACGCCAACAGG 108534 || ||| | || |||||||||| | | ||||| ||||| || |||||| || | | Sbjct 160773 GACCACCGTGTGCACCACAAGTTCACCGACACACACGCCGATCCCCACAACTCCCGCCGC 160832 Query 108535 GGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGACGTGA 108589 || |||| ||| | ||| |||| ||||| ||| | ||| ||||||| |||| Sbjct 160833 GGCTTCTTCTTCGCCCACATGGGCTGGCTGATGTGCAAGAAGCACCCCGATGTGA 160887 >seq1354 Length=344 Score = 93.3 bits (102), Expect = 3e-14 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 108862 AACAAATTGGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTC 108921 ||||| ||||| | | ||| | ||||||||||||||||||||||||||||||| ||| Sbjct 122 AACAAGCTGGTGTCCACCTTGACCATCGGCGAGGGATGGCACAACTACCACCACGTCTTC 63 Query 108922 CCCTACGACTACAAGGCCGCCGAGTTGGG 108950 |||| ||||||||||| || ||| |||| Sbjct 62 CCCTGGGACTACAAGGCAGCTGAGCTGGG 34 >seq6851 Length=104827 Score = 84.2 bits (92), Expect = 2e-11 Identities = 74/92 (80%), Gaps = 3/92 (3%) Strand=Plus/Minus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 |||| |||||||||| ||||| |||||||||||||| ||||||| ||||||||| | | Sbjct 63440 TGGCCTTCGGCGAGGGGTGGCATAACTACCACCACGTCTTCCCCTGGGACTACAAGACGG 63381 Query 108941 CCGAGTTGGGGAACGACT---TTAATTTCACC 108969 ||||||| || || ||| | || |||||| Sbjct 63380 CCGAGTTCGGCAAATACTCGCTAAACTTCACC 63349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381732413209920