Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq2 89.7 4e-13
seq1 82.4 5e-11
>seq2
Length=2985096
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| || || ||||| || || || || |||||||| ||| | | | | | || ||
Sbjct 123947 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGTCCATCCTCC 123888
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
|| || || || ||| | |||| |||||| ||||| ||||| || ||||||||
Sbjct 123887 AACTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 123828
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| ||| || ||| | || || |||||| | || || || || || ||||| ||
Sbjct 123827 ATCTTGGCCTTAACATTCTCGATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTCTTG 123768
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
|| ||||| ||||| || ||||||||||| ||
Sbjct 123767 CCAGTCAGGGTTTTCACGAAAATTTGCATGTT 123736
>seq1
Length=22559587
Score = 82.4 bits (90), Expect = 5e-11
Identities = 113/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081
||||| | || ||||||||| | |||| |||||| || || ||||||||||| |||
Sbjct 20155475 TCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTG 20155416
Query 15082 TCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141
|| ||| ||| ||| ||| |||| |||||||| | ||| || || | || |||
Sbjct 20155415 TCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACCTCAAGAGTGATG 20155356
Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
|| || || || || || || || || || ||||| ||
Sbjct 20155355 GTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATCTT 20155318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357354192393800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |