Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq4563 136 5e-27
>seq4563
Length=14502029
Score = 136 bits (150), Expect = 5e-27
Identities = 293/433 (68%), Gaps = 4/433 (1%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
||| || || ||| |||||| |||||||| ||||| || || || ||| |||||||
Sbjct 3739881 GTACTCGCCCACCTTCTTCTCAAAGAAGTTCGTCTTTCCGTCCAGCGAGATCATCTCCAT 3739822
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCA-ATCTGTTTGAGGAGAC 127349
|| | ||| |||||||| | || | ||| ||| || | | | || || || |
Sbjct 3739821 GAAGTTAAAGGGGTTCTTGGTATTGTAGATT-TTGCCAACGCTCAACTCCACCAGCAGTC 3739763
Query 127350 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 127409
| |||| ||| | |||||||||| ||||| || ||||||| |||||||||||
Sbjct 3739762 GGTCCGCCACGAATTCAATGTACTGCGACATAAGATCGCAGTTCATGCCGATGAGGTTTA 3739703
Query 127410 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGT 127469
|| | || || | |||| ||| ||||||| |||| || || || | ||| ||
Sbjct 3739702 CGGGCAAGGCATCGGTTAAGAACTCCTGCTCAATGGCCACCGCATCGCGGATGATCTCGA 3739643
Query 127470 GAATAGTGTCCACCCCAGGTCTATTGCGTAAAGT-CTTGAAGAGTTCCACAGCAAACTCT 127528
|| | | | | || || ||| |||| || ||| | ||| ||||| ||
Sbjct 3739642 TGAT-GCGCTCGCGCCTGGGTCGCTGCACCAAGTGCTGGAACATCAGCACGGCAAAGTCG 3739584
Query 127529 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGA 127588
|| | |||||||| |||||||| || || || |||||| ||| || ||||| |||
Sbjct 3739583 CAATGCAAGCCCTCGTCGCGGGAGATAAGCTCGTTGGAGAAGGTCAGTCCCGGCATCAGA 3739524
Query 127589 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 127648
|| |||||||||| ||||||||| | ||| ||| ||||||||| ||||| ||
Sbjct 3739523 CCGCGCTTCTTCAGCCAGAAAATGGAGGCAAAGCTGCCGCTGAAGAAGATGCCCTCGACG 3739464
Query 127649 CACGCGAACGCAA 127661
||||| ||||
Sbjct 3739463 GCAGCGAAGGCAA 3739451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613440634468800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |