Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 4e-15
seq4958 89.7 2e-12
>seq1
Length=22559587
Score = 98.7 bits (108), Expect = 4e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || || || || || || || |||||||| || ||| | ||
Sbjct 20155321 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAACCTTCG 20155380
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || ||| | | ||| || ||||| || || |||||||||||||| |||||
Sbjct 20155381 GATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAG 20155440
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| | || ||| | || || || || |||||||| | || | | || |||||
Sbjct 20155441 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTATAAC 20155500
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258
||| | ||||| | || | ||||| ||
Sbjct 20155501 ATTCAGAAGGAGTCCACTTTGCACTTGGT 20155529
>seq4958
Length=11938465
Score = 89.7 bits (98), Expect = 2e-12
Identities = 207/310 (67%), Gaps = 4/310 (1%)
Strand=Plus/Plus
Query 452084 GATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATT 452143
||||| |||||||| || || || |||| || ||||| ||| ||||||| | | ||
Sbjct 4701336 GATGTCACACCTCTGTCCCTGGGCATTGAGACCGCTGGCGGAGTGATGACCACGCTGATC 4701395
Query 452144 AAACGAGGAACTTCT--ATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGTGATA 452201
||| |||||| | || || || ||| || | || | || || |
Sbjct 4701396 AAA--AGGAACACCACCATACCCACCAAGCAGACGCAGATCTTCACCACTTATGCGGACA 4701453
Query 452202 ACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATA 452261
|||| |||||||| || || ||||||||||| || || || ||||| || ||||| |
Sbjct 4701454 ACCAGCCAGGTGTGCTCATCCAGGTGTTTGAAGGTGAGCGGGCCATGACGCGGGATAACA 4701513
Query 452262 ATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAA 452321
||| || || |||| || || |||||| || ||| | ||| || |||
Sbjct 4701514 ATAGCCTGGGTAAATTCGAACTATCGGCCATTCCGCCGGCTCCACGTGGAGTGCCCCAAG 4701573
Query 452322 TTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAAT 452381
| || | |||| ||| |||| |||||||||||||| || |||| |||| | || || |
Sbjct 4701574 TGGAGGTGACCTTTGACATTGACGCAAATGGTATTCTCAACGTGACTGCACTGGAGAAGT 4701633
Query 452382 CATCTGGAAA 452391
|| | || ||
Sbjct 4701634 CAACAGGCAA 4701643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975498675417440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |