Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 4e-15 seq4958 89.7 2e-12 >seq1 Length=22559587 Score = 98.7 bits (108), Expect = 4e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || || || || || |||||||| || ||| | || Sbjct 20155321 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAACCTTCG 20155380 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | | ||| || ||||| || || |||||||||||||| ||||| Sbjct 20155381 GATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAG 20155440 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || || |||||||| | || | | || ||||| Sbjct 20155441 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTATAAC 20155500 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| | || | ||||| || Sbjct 20155501 ATTCAGAAGGAGTCCACTTTGCACTTGGT 20155529 >seq4958 Length=11938465 Score = 89.7 bits (98), Expect = 2e-12 Identities = 207/310 (67%), Gaps = 4/310 (1%) Strand=Plus/Plus Query 452084 GATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATT 452143 ||||| |||||||| || || || |||| || ||||| ||| ||||||| | | || Sbjct 4701336 GATGTCACACCTCTGTCCCTGGGCATTGAGACCGCTGGCGGAGTGATGACCACGCTGATC 4701395 Query 452144 AAACGAGGAACTTCT--ATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGTGATA 452201 ||| |||||| | || || || ||| || | || | || || | Sbjct 4701396 AAA--AGGAACACCACCATACCCACCAAGCAGACGCAGATCTTCACCACTTATGCGGACA 4701453 Query 452202 ACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATA 452261 |||| |||||||| || || ||||||||||| || || || ||||| || ||||| | Sbjct 4701454 ACCAGCCAGGTGTGCTCATCCAGGTGTTTGAAGGTGAGCGGGCCATGACGCGGGATAACA 4701513 Query 452262 ATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAA 452321 ||| || || |||| || || |||||| || ||| | ||| || ||| Sbjct 4701514 ATAGCCTGGGTAAATTCGAACTATCGGCCATTCCGCCGGCTCCACGTGGAGTGCCCCAAG 4701573 Query 452322 TTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAAT 452381 | || | |||| ||| |||| |||||||||||||| || |||| |||| | || || | Sbjct 4701574 TGGAGGTGACCTTTGACATTGACGCAAATGGTATTCTCAACGTGACTGCACTGGAGAAGT 4701633 Query 452382 CATCTGGAAA 452391 || | || || Sbjct 4701634 CAACAGGCAA 4701643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975498675417440