Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq6677 132 4e-25
seq8559 127 2e-23
seq137 105 5e-17
>seq6677
Length=374367
Score = 132 bits (146), Expect = 4e-25
Identities = 269/397 (68%), Gaps = 7/397 (2%)
Strand=Plus/Minus
Query 517916 TTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCT 517975
|| || | |||||| ||||| || || | ||| || || | || | || | |||
Sbjct 1496 TTTGCCCTTTCACAAGCTGTTCTCAGACGTCGCAAAGCCCTGGCATTTCCCTTGATATCC 1437
Query 517976 GTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAAT 518033
| || | || ||||| || || ||| || | ||| | || || || ||||||||||
Sbjct 1436 GACTTGTGCTTCCTCTTAAACTCCTCAGCAAA--ATGGTTGACCAGCCGGTTATCAAAAT 1379
Query 518034 CTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT---CCATCTT 518090
| ||||| ||||| | ||| | ||| | ||| | |||| | ||| || || || |
Sbjct 1378 CCTCACCACCCAAGTGAGTGTCTCCAGCCGTGGACTTTACCTCGAAGAGGGAGCCCTCAT 1319
Query 518091 CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 518150
||| | || || | ||||| ||| || ||||||| || ||||| || |||||
Sbjct 1318 CAATGGTCAGAATGGAGACATCGAAGGTGCCGCCACCCAGGTCGAAAATCAGAACATTGC 1259
Query 518151 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 518210
|| | |||| ||||| | ||||| || || ||||| ||||| ||||| ||||
Sbjct 1258 GCTCCCCCTTGAGGTTCTTATCCAATCCATAGGCCAAGGCAGCCGCAGTGGGTTCGTTAA 1199
Query 518211 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 518270
| || |||| ||||| || || ||||| || ||||| || || || |||| ||
Sbjct 1198 TGATCCTCAGCACATTCAGCCCCGCAATGGAACCCGCATCCTTGGTTGCCTGTCGCTGGC 1139
Query 518271 AATCGTTAAAATATGCAGGAACAGTAATAACGGCATC 518307
|||||||||||| || || || ||||| ||||| ||
Sbjct 1138 TATCGTTAAAATAGGCTGGCACCGTAATCACGGCGTC 1102
>seq8559
Length=59032
Score = 127 bits (140), Expect = 2e-23
Identities = 268/397 (68%), Gaps = 7/397 (2%)
Strand=Plus/Plus
Query 517916 TTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCT 517975
|| || | |||||| |||||||| | | ||| || || | || | || | |||
Sbjct 19721 TTTGCCCTTTCACAAGCTGTCCTCAAACGTCGCAAAGCCCTGGCATTTCCCTTGATATCC 19780
Query 517976 GTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAAT 518033
| || | || ||||| || || ||| || | ||| | || || || ||||||||||
Sbjct 19781 GACTTGTGCTTCCTCTTAAACTCCTCAGCAAA--ATGGTTGACCAGCCGGTTATCAAAAT 19838
Query 518034 CTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG---TCCATCTT 518090
| ||||| ||||| | ||| | ||| | ||| | |||| | ||| || || || |
Sbjct 19839 CCTCACCACCCAAGTGAGTGTCTCCAGCCGTGGACTTTACCTCGAAGAGGGAGCCCTCAT 19898
Query 518091 CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 518150
||| | || || | ||||| ||| || ||||||| || ||||| || |||||
Sbjct 19899 CAATGGTCAGAATGGAGACATCGAAGGTGCCGCCACCCAGGTCGAAAATCAGAACATTGC 19958
Query 518151 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 518210
|| | |||| ||||| | || || || || ||||| ||||| |||||||| |
Sbjct 19959 GCTCCCCCTTGAGGTTCTTATCTAATCCGTAGGCCAAGGCAGCCGCAGTGGGTTCATTGA 20018
Query 518211 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 518270
| || |||| ||||| || |||||||| || ||||| || || || || | ||
Sbjct 20019 TGATCCTCAGCACATTTAGCCCAGCAATGGAGCCCGCATCCTTGGTCGCCTGACGCTGGC 20078
Query 518271 AATCGTTAAAATATGCAGGAACAGTAATAACGGCATC 518307
|||||| ||||| || || || ||||| ||||||||
Sbjct 20079 TATCGTTGAAATAGGCTGGCACCGTAATTACGGCATC 20115
>seq137
Length=289679
Score = 105 bits (116), Expect = 5e-17
Identities = 180/261 (69%), Gaps = 0/261 (0%)
Strand=Plus/Plus
Query 518453 AATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAAT 518512
|| ||||||| ||||| || || || ||| ||| | || | | ||||| ||
Sbjct 77019 AAGGGCCAGTGCTTCATGTCAGACTGCACAGCAGAGTCCTCGAACTTGCGGCCAATCAAA 77078
Query 518513 CGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCT 518572
|| || ||||| || || || | ||| || || || || | || | ||||| |||||
Sbjct 77079 CGCTTGGCATCGAAGATCGTCTGGGTCGGGTTCATGGCCACCTGGTTCTTGGCGGCATCG 77138
Query 518573 CCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGA 518632
|| |||||| | || || || || || | |||||| |||||||| || |||||||| ||
Sbjct 77139 CCGATCAGACGCTCCGTATCGGTGAAGGCAACATAGGATGGAGTGGTACGATTACCCTGG 77198
Query 518633 TCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTT 518692
|| || || || || || || || |||| || | || || || || | || ||
Sbjct 77199 TCGTTGGCGATGATCTCGACCTTGCCATGCTGGAACACTCCCACGCACGAGTAGGTCGTG 77258
Query 518693 CCTAAATCAATACCAATAGCA 518713
|| ||||||||||||| ||||
Sbjct 77259 CCCAAATCAATACCAACAGCA 77279
Score = 105 bits (116), Expect = 5e-17
Identities = 180/261 (69%), Gaps = 0/261 (0%)
Strand=Plus/Plus
Query 518453 AATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAAT 518512
|| ||||||| ||||| || || || ||| ||| | || | | ||||| ||
Sbjct 85062 AAGGGCCAGTGCTTCATGTCAGACTGCACAGCAGAGTCCTCGAACTTGCGGCCAATCAAA 85121
Query 518513 CGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCT 518572
|| || ||||| || || || | ||| || || || || | || | ||||| |||||
Sbjct 85122 CGCTTGGCATCGAAGATCGTCTGGGTCGGGTTCATGGCCACCTGGTTCTTGGCGGCATCG 85181
Query 518573 CCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGA 518632
|| |||||| | || || || || || | |||||| |||||||| || |||||||| ||
Sbjct 85182 CCGATCAGACGCTCCGTATCGGTGAAGGCAACATAGGATGGAGTGGTACGATTACCCTGG 85241
Query 518633 TCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTT 518692
|| || || || || || || || |||| || | || || || || | || ||
Sbjct 85242 TCGTTGGCGATGATCTCGACCTTGCCATGCTGGAACACTCCCACGCACGAGTAGGTCGTG 85301
Query 518693 CCTAAATCAATACCAATAGCA 518713
|| ||||||||||||| ||||
Sbjct 85302 CCCAAATCAATACCAACAGCA 85322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780391669808080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |