Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq3275 105 8e-18
>seq3275
Length=287013
Score = 105 bits (116), Expect = 8e-18
Identities = 198/283 (70%), Gaps = 10/283 (4%)
Strand=Plus/Plus
Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTA-TTCCTATGGGATACGGAGGTCCTCA 158480
|| |||||||| || | | | | | || ||| | ||||| |||| || || || || ||
Sbjct 260523 GATATTGCTGTGGGAACT-TCCCAGCGTCTGGGAGTTCCTCTGGGCTATGGTGGACCCCA 260581
Query 158481 TGCTGCATTCTTTGCAACAACAGACA-AGTATAA-GAGAAAGATACCTGGCAGAATTGTA 158538
||||| |||||| || | || ||| ||| | | | ||| || ||||| || |
Sbjct 260582 TGCTGGATTCTTCGC--CTGCAAACAGAGTTTGGTGCGCTTGATGCCCGGCAGGATGATC 260639
Query 158539 GGTCAGTCAGTAG--ATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAG 158596
|| |||| || | | || || ||| | || ||| |||| || || || || ||||
Sbjct 260640 GGG--GTCACCAGGGACATGGACGGAAATGATGCCTACCGATTGGCCCTGCAAACCAGAG 260697
Query 158597 AGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGG 158656
||||||| ||| |||||||||| || || |||||||||||||| || || || || ||||
Sbjct 260698 AGCAGCACATCCGAAGAGACAAGGCCACGAGTAACATCTGCACGGCTCAGGCTCTTCTGG 260757
Query 158657 CTAATATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGG 158699
| |||||||| | | ||||| || |||||| | || ||
Sbjct 260758 CCAATATGTCGGCCATGTATGCCATTTACCATGGTCCCGAGGG 260800
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 587987396444800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |