Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq3275 105 8e-18 >seq3275 Length=287013 Score = 105 bits (116), Expect = 8e-18 Identities = 198/283 (70%), Gaps = 10/283 (4%) Strand=Plus/Plus Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTA-TTCCTATGGGATACGGAGGTCCTCA 158480 || |||||||| || | | | | | || ||| | ||||| |||| || || || || || Sbjct 260523 GATATTGCTGTGGGAACT-TCCCAGCGTCTGGGAGTTCCTCTGGGCTATGGTGGACCCCA 260581 Query 158481 TGCTGCATTCTTTGCAACAACAGACA-AGTATAA-GAGAAAGATACCTGGCAGAATTGTA 158538 ||||| |||||| || | || ||| ||| | | | ||| || ||||| || | Sbjct 260582 TGCTGGATTCTTCGC--CTGCAAACAGAGTTTGGTGCGCTTGATGCCCGGCAGGATGATC 260639 Query 158539 GGTCAGTCAGTAG--ATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAG 158596 || |||| || | | || || ||| | || ||| |||| || || || || |||| Sbjct 260640 GGG--GTCACCAGGGACATGGACGGAAATGATGCCTACCGATTGGCCCTGCAAACCAGAG 260697 Query 158597 AGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGG 158656 ||||||| ||| |||||||||| || || |||||||||||||| || || || || |||| Sbjct 260698 AGCAGCACATCCGAAGAGACAAGGCCACGAGTAACATCTGCACGGCTCAGGCTCTTCTGG 260757 Query 158657 CTAATATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGG 158699 | |||||||| | | ||||| || |||||| | || || Sbjct 260758 CCAATATGTCGGCCATGTATGCCATTTACCATGGTCCCGAGGG 260800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587987396444800