Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq3325 156 9e-33
seq4812 145 2e-29
seq1 134 3e-26
>seq3325
Length=21082
Score = 156 bits (172), Expect = 9e-33
Identities = 161/211 (76%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| | ||| | || ||||| || ||||| |||||||||| || || | ||||| ||
Sbjct 20280 AACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAATCGGACAGGGTGCGACCATCCTC 20221
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
|||||||| || |||||||| || || || || ||||| || ||||| || ||||||||
Sbjct 20220 AAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGGGGGATGCCCTCCTTGTCTTG 20161
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| || ||||||||| ||||||||||||||| |||||| || ||||| | |||||
Sbjct 20160 GATCTTAGCCTTGACGTTTTCAATGGTGTCCGAAGGTTCCACCTCCAGGGTGATGGTCTT 20101
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|| || | |||||| || || | ||||||
Sbjct 20100 GCCAGTAAGAGTTTTGACAAAGATCTGCATT 20070
Score = 138 bits (152), Expect = 3e-27
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || || || ||||| |||| || || | || || || || ||
Sbjct 20502 GTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGTTG 20443
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| || ||||||||||| || || || ||||| || ||||| || ||||| || |||||
Sbjct 20442 TTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGGATTTT 20383
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| ||||| ||||| ||||||||| || |||||||| || | |||||||| ||
Sbjct 20382 AGCCTTTACGTTTTCAATAGTGTCCGAAGGCTCTACTTCAAGAGTGATGGTCTTTCCGGT 20323
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|||||| || ||||| | |||||
Sbjct 20322 CAAAGTCTTGACGAAAATCTGCAT 20299
Score = 111 bits (122), Expect = 3e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || || || ||||| |||| || || | || || || || ||
Sbjct 19590 GTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGTTG 19531
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| || ||||||||||| || || || ||||| || ||||| || || || || |||||
Sbjct 19530 TTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGGATGCCCTCCTTATCCTGGATTTT 19471
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| || |||||||| || || || ||||| || | |||| |||||||| ||
Sbjct 19470 GGCCTTCACATTCTCAATCGTATCGGAGGGCTCCACCTCCAAAGTAATGGTCTTTCCAGT 19411
Query 195117 CAAAGTTTTTACGAACACTTGCATTT 195142
||| || || || || | |||||||
Sbjct 19410 CAAGGTCTTCACAAAGATCTGCATTT 19385
Score = 93.3 bits (102), Expect = 9e-14
Identities = 140/199 (70%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002
||| || || || || || |||||||||| || || | || || || || || || ||
Sbjct 20724 AGTCGATTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCCTCCAGTTGTTTGCC 20665
Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062
|||||||| | ||| || || ||||| || ||||| || ||||| || || || |||
Sbjct 20664 GGCGAAGATCAATCGCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTT 20605
Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122
|| || ||||||||||| || || ||||| | ||| | ||||| || || | ||
Sbjct 20604 CACATTTTCAATGGTGTCTGATGGCTCAACTTCCAAGGTGATGGTCTTGCCAGTAAGTGT 20545
Query 195123 TTTTACGAACACTTGCATT 195141
|| || || | ||||||
Sbjct 20544 CTTGACAAAGATCTGCATT 20526
>seq4812
Length=908733
Score = 145 bits (160), Expect = 2e-29
Identities = 151/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
|| ||||| || ||||| |||||||||| | ||| | ||||| || |||||||| ||
Sbjct 620089 GTCGACTCCTTCTGAATGTTGTAATCGGACAAAGTGCGACCATCCTCAAGCTGCTTTCCG 620148
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
|||||||| || || || || ||||| ||||| || || |||||||| || || |||
Sbjct 620149 GCGAAGATGAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTGGATCTTGGCTTTG 620208
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
||||| ||||||||||| ||| ||||| || ||||| | ||||| || || | ||||
Sbjct 620209 ACGTTTTCAATGGTGTCTGAAGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTAAGAGTT 620268
Query 195124 TTTACGAACACTTGCATT 195141
|| ||||| | ||||||
Sbjct 620269 TTGACGAAGATCTGCATT 620286
Score = 145 bits (160), Expect = 2e-29
Identities = 149/195 (76%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 194947 GACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCG 195006
||||| || || || || ||||||| | ||| | || || || |||||||| || |||
Sbjct 620500 GACTCCTTCTGGATGTTATAATCGGACAAAGTGCGACCGTCCTCAAGCTGCTTTCCGGCG 620559
Query 195007 AAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACG 195066
|||||||| || || || ||||| ||||| || || |||||||| ||||| ||| |||
Sbjct 620560 AAGATAAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTGGATTTTGGCCTTTACG 620619
Query 195067 TTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTT 195126
|| ||||||||||||||| ||||| || ||||| | ||||| || || | ||||||
Sbjct 620620 TTTTCAATGGTGTCCGAAGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTAAGAGTTTTG 620679
Query 195127 ACGAACACTTGCATT 195141
||||| | ||||||
Sbjct 620680 ACGAAGATCTGCATT 620694
Score = 129 bits (142), Expect = 1e-24
Identities = 142/189 (75%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || || || ||||| |||| || || | || || || || ||
Sbjct 620310 GTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGTTG 620369
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| || ||||||||||| || || || ||||| ||||| || || |||||||| || ||
Sbjct 620370 TTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTGGATCTT 620429
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| ||||||||||||||| ||||| || ||||| | ||||| || ||
Sbjct 620430 GGCCTTGACGTTTTCAATGGTGTCCGAAGGCTCCACCTCCAGGGTGATGGTCTTGCCAGT 620489
Query 195117 CAAAGTTTT 195125
| ||||||
Sbjct 620490 AAGAGTTTT 620498
>seq1
Length=22559587
Score = 134 bits (148), Expect = 3e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| | ||||||||| || ||||| || || || | || || | |||||||| |||||
Sbjct 20155524 GTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATCTTCCAGCTG 20155465
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || || || || ||||||||||| ||||||||||| ||||| ||
Sbjct 20155464 CTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTT 20155405
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||| || || || || |||||| ||| || ||||| || | ||||| || ||
Sbjct 20155404 GGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACCTCAAGAGTGATGGTCTTGCCCGT 20155345
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | |||||
Sbjct 20155344 GAGGGTCTTCACGAAGATCTGCAT 20155321
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || || ||||| || || || ||||| |||| || |||| || || ||
Sbjct 1136963 ACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTCCTCC 1137022
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || || || ||||| || || || || ||||| ||
Sbjct 1137023 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGG 1137082
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| || ||||| |||||||||||| ||||| || | ||| | |||||
Sbjct 1137083 ATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCACCTCCAAGGTGATGGTCTTG 1137142
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | ||||| ||||| | ||||||
Sbjct 1137143 CCGGTGAGGGTTTTCACGAAGATTTGCAT 1137171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109358211777560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |