Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq1 109 4e-19
seq4812 104 2e-17
seq3325 100 2e-16
>seq1
Length=22559587
Score = 109 bits (120), Expect = 4e-19
Identities = 156/216 (72%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | ||| || ||||||||||||||||| || ||| | || |||| |||
Sbjct 20155529 ACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATCTTCC 20155470
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || || || || || || ||||| ||| | || | || || ||||| |
Sbjct 20155469 AGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGA 20155410
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGT 34948
||||| |||||| || | ||||| | ||| | || || || | || |||||
Sbjct 20155409 ATCTTGGCTTTGAC--AT--TTTCGATAGTATCCGAAGGTTCGACCTCAAGAGTGATGGT 20155354
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|| |||||||| |||||||| ||||||||||| ||
Sbjct 20155353 CTTGCCCGTGAGGGTCTTCACGAAGATCTGCATCTT 20155318
Score = 89.7 bits (98), Expect = 3e-13
Identities = 139/195 (71%), Gaps = 8/195 (4%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| || ||| |||| | || |||||||| || ||||| ||
Sbjct 1136981 TCCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 1137040
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||| ||| | || | ||||||||||| ||||| || || ||
Sbjct 1137041 ATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCAC--AT 1137098
Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| ||||| | ||| | ||| || || | ||| ||||| || || ||||| || ||
Sbjct 1137099 --TCTCGATGGTGTCCGAAGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTTTT 1137156
Query 34967 CACAAAGATCTGCAT 34981
||| ||||| |||||
Sbjct 1137157 CACGAAGATTTGCAT 1137171
>seq4812
Length=908733
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| || ||| | ||| | || ||||| || || ||||| ||
Sbjct 619867 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCGTCCTCCAGTTGCTTGCCGGCGAAG 619926
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||||||| | || | ||||||||||| ||||| |||||| |
Sbjct 619927 ATGAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTT 619986
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | ||| | ||| || || | || ||||| ||||| || | |||||||||
Sbjct 619987 TCAATGGTATCAGAAGGCTCGACTTCCAGAGTAATGGTCTTTCCGGTCAAAGTCTTCACG 620046
Query 34971 AAGATCTGCATA 34982
||||| ||||||
Sbjct 620047 AAGATTTGCATA 620058
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| || || || | | || |||| || ||||| |||||||| ||
Sbjct 620095 TCCTTCTGAATGTTGTAATCGGACAAAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAG 620154
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||| ||| | || | ||||||||||| ||||| ||||||| |
Sbjct 620155 ATGAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTGGATCTTGGCTTTGACGTTT 620214
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | ||| || || | ||| ||||| || || || ||||| || ||
Sbjct 620215 TCAATGGTGTCTGAAGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTAAGAGTTTTGACG 620274
Query 34971 AAGATCTGCAT 34981
|||||||||||
Sbjct 620275 AAGATCTGCAT 620285
Score = 82.4 bits (90), Expect = 5e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || ||||| ||||| ||||| || ||| | ||| | || |||
Sbjct 620305 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCC 620364
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|| ||||| ||||| || || || || ||||| ||| | || | |||||||||||
Sbjct 620365 AGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTGG 620424
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | | || | || | ||| || || | ||| ||||| ||
Sbjct 620425 ATCTTGGCCTTGACGTTTTCAATGGTGTCCGAAGGCTCCACCTCCAGGGTGATGGTCTTG 620484
Query 34953 CCCGTGAGAGTCTTC 34967
|| || ||||| |||
Sbjct 620485 CCAGTAAGAGTTTTC 620499
>seq3325
Length=21082
Score = 100 bits (110), Expect = 2e-16
Identities = 150/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||||| ||| || ||||| ||||| || || || | | || |||| |||
Sbjct 19823 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTGCGACCATCCTCC 19764
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| |||||||| || || || || ||||| ||| | || | |||||||||||
Sbjct 19763 AGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGG 19704
Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
||||| || || || || || | ||| | |||||| || | || |||||||
Sbjct 19703 ATCTTGGCCTTCAC--ATTCTCGATGGTATCAGAAGGCTCAACTTCAAGAGTGATGGTTT 19646
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || || | |||||| ||||||||||||||
Sbjct 19645 TGCCGGTCAAAGTCTTGACAAAGATCTGCAT 19615
Score = 100 bits (110), Expect = 2e-16
Identities = 150/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||||| ||| || ||||| ||||| || || || | | || |||| |||
Sbjct 20051 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTGCGACCATCCTCC 19992
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| |||||||| || || || || ||||| ||| | || | |||||||||||
Sbjct 19991 AGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGG 19932
Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
||||| || || || || || | ||| | |||||| || | || |||||||
Sbjct 19931 ATCTTGGCCTTCAC--ATTCTCGATGGTATCAGAAGGCTCAACTTCAAGAGTGATGGTTT 19874
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || || | |||||| ||||||||||||||
Sbjct 19873 TGCCGGTCAAAGTCTTGACAAAGATCTGCAT 19843
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||||||| | || || ||||||||||| || || || ||| | || |||| ||
Sbjct 20280 AACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAATCGGACAGGGTGCGACCATCCTC 20221
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
||||| |||||||| || || || || ||||| ||| | || | |||||||||||
Sbjct 20220 AAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGGGGGATGCCCTCCTTGTCTTG 20161
Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951
||||| |||||| | | || | || | || || || | ||| ||||| ||
Sbjct 20160 GATCTTAGCCTTGACGTTTTCAATGGTGTCCGAAGGTTCCACCTCCAGGGTGATGGTCTT 20101
Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || ||||| || ||||||||||||||
Sbjct 20100 GCCAGTAAGAGTTTTGACAAAGATCTGCAT 20071
Score = 95.1 bits (104), Expect = 8e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
|||||| || | || ||| ||||| ||||| || || || ||| | ||| | || ||
Sbjct 20736 AACCAAATGCAAAGTCGATTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCCTC 20677
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
||| ||||| ||||| || || | ||| ||||| ||| | || | |||||||||||
Sbjct 20676 CAGTTGTTTGCCGGCGAAGATCAATCGCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTG 20617
Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951
||||| || || | | || | || | |||||| || | ||| ||||| ||
Sbjct 20616 GATCTTGGCCTTCACATTTTCAATGGTGTCTGATGGCTCAACTTCCAAGGTGATGGTCTT 20557
Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || || ||||| ||||||||||||||
Sbjct 20556 GCCAGTAAGTGTCTTGACAAAGATCTGCAT 20527
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/214 (70%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || ||||| ||||| ||||| || ||| | ||| | || |||
Sbjct 19595 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCC 19536
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|| ||||| ||||| || || || || ||||| ||| | || | |||||||| ||
Sbjct 19535 AGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGGATGCCCTCCTTATCCTGG 19476
Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
|| || || || || || |||| || || ||| || || | || ||||| |
Sbjct 19475 ATTTTGGCCTTCAC--ATTCTCAATCGTATCGGAGGGCTCCACCTCCAAAGTAATGGTCT 19418
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|||| || | |||||||||||||||||||| ||
Sbjct 19417 TTCCAGTCAAGGTCTTCACAAAGATCTGCATTTT 19384
Score = 86.0 bits (94), Expect = 4e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || ||||| ||||| ||||| || ||| | ||| | || |||
Sbjct 20507 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCC 20448
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|| ||||| ||||| || || || || ||||| ||| | || | |||||||||||
Sbjct 20447 AGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGG 20388
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|| || || ||| | | || | || | ||| || || | || ||||| |||
Sbjct 20387 ATTTTAGCCTTTACGTTTTCAATAGTGTCCGAAGGCTCTACTTCAAGAGTGATGGTCTTT 20328
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || | |||||| || || |||||||||
Sbjct 20327 CCGGTCAAAGTCTTGACGAAAATCTGCATA 20298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324599257823040
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