Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq8559 93.3 3e-13 >seq8559 Length=59032 Score = 93.3 bits (102), Expect = 3e-13 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 |||| |||||| ||||| || || ||||| ||||| || || || ||||| || || Sbjct 20121 GTTAAGGATGCCGTAATTACGGTGCCAGCCTATTTCAACGATAGCCAGCGTCAGGCGACC 20062 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 || ||||| || |||||||| || ||||| || | || ||||||||||| ||||| Sbjct 20061 AAGGATGCGGGCTCCATTGCTGGGCTAAATGTGCTGAGGATCATCAATGAACCCACTGCG 20002 Query 550511 GCTGCACTTGCATATGGACTTGATAA 550536 ||||| | || || ||| | ||||| Sbjct 20001 GCTGCCTTGGCCTACGGATTAGATAA 19976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028836962453200