Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq4563 140 4e-28 >seq4563 Length=14502029 Score = 140 bits (154), Expect = 4e-28 Identities = 166/224 (74%), Gaps = 1/224 (0%) Strand=Plus/Minus Query 197067 GTACATCTGGTTGTCGGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCT 197126 |||| || ||| |||| || || |||||||| ||||| | || || ||||| ||||| Sbjct 1630686 GTACTCCTCGTTTTCGGTATCATAGCAGGCGAGCAAGAATCCTCCATACGTTCCAGTTCT 1630627 Query 197127 CTTTCCCACCCCGTTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTC 197186 ||| || ||| |||| || || |||||||||||||| | ||||| || Sbjct 1630626 TCGGCCCTTACCTTTGTAGCCGCCTATCACCACCAGATCCAGTGAGTCGCCTACATTGGA 1630567 Query 197187 CATGTAATCTTTCTTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGC 197246 |||||||| ||||||||||| |||||| | | ||||||||||||||||| || || || Sbjct 1630566 TATGTAATCCTTCTTCAGTTTCAGCCAGTTCCGGGATCTCTTGGCAATCTCATACGTGGC 1630507 Query 197247 GTTTACGTCCAGGGTCTTGATCATCAATCCCTCGCAATCTTCCT 197290 | ||||||| ||||| | ||| | |||||||||| ||||| Sbjct 1630506 CTCCTCGTCCAGAGTCTTTACCATTAGACCCTCGCAAT-TTCCT 1630464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676656174838400