Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq4563 260 3e-64
seq1 136 7e-27
>seq4563
Length=14502029
Score = 260 bits (288), Expect = 3e-64
Identities = 561/827 (68%), Gaps = 19/827 (2%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || ||||| | |||||||||||||| ||||| || |||| |||||| ||||
Sbjct 3739884 CTGGTACTCGCCCACCTTCTTCTCAAAGAAGTTCGTCTTTCCGTCCAGCGAGATCATCTC 3739825
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957
||||||| |||||||| || || || | || || || || || ||||||
Sbjct 3739824 CATGAAGTTAAAGGGGTTCTTGGTATTGTAGATTT-TGCCAACGCTCAACTCCACCAGCA 3739766
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
| | ||||| ||| | || ||||| | ||||| || | ||||||||| ||||||
Sbjct 3739765 GTCGGTCCGCCACGAATTCAATGTACTGCGACATAAGATCGCAGTTCATGCCGATGAGGT 3739706
Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
|||||||| || | || | ||||||| ||| || ||| || || | | ||||
Sbjct 3739705 TTACGGGCAAGGCATCGGTTAAGAACTCCTGCTCAATGGCCACCGCATCGCGGATGATCT 3739646
Query 48078 GCTTAACGCGGGACTCTGAG---GGTTTGTTGCGC-AGGTGCTTGGCATAGAGCATGCA- 48132
| | ||| ||| | | || | | ||| | | ||||| | | | || |||
Sbjct 3739645 CGATGATGCG---CTC-GCGCCTGGGTCGCTGCACCAAGTGCTGGA---ACATCA-GCAC 3739594
Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192
||||||||| | |||||||| ||||| ||| ||| ||| ||||||||||| || ||
Sbjct 3739593 GGCAAAGTCGCAATGCAAGCCCTCGTCGCGGGAGATAAGCTCGTTGGAGAAGGTCAGTCC 3739534
Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252
||||| | || | || || ||||||||||| | || || ||| |||||||||
Sbjct 3739533 CGGCATCAGACCGCGCTTCTTCAGCCAGAAAATGGAGGCAAAGCTGCCGCTGAAGAAGAT 3739474
Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312
|||||| || || ||||| || ||| | ||| |||||| || ||| |||||
Sbjct 3739473 GCCCTCGACGGCAGCGAAGGCAATGATGCGCTCCCCGAAATTGGCCGATTTGGAGGAGAT 3739414
Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372
||||||||| |||||||| ||||| ||| | ||||| ||||| ||||| |||
Sbjct 3739413 CCAGGAAAGGGCCCAGTCCGCCTTGCGCTTCACAGCCGGCATTGTCTCGATGGCGTTGAA 3739354
Query 48373 GAGCTTCTTGCACTCACCTGCG--TCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATC 48430
|| | | | || | |||| ||| | || || || |||| ||||||
Sbjct 3739353 CAGGTAGTCCCGCTGA--TGCGGATCCCGGATGTAAGTGTCGATCAGCACACTGTACATT 3739296
Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490
|| |||||||| ||||| || ||||| ||||| || |||||| || ||||| | |
Sbjct 3739295 TCCGAGTGCACGTTCTCCATGGCGATTTGGAAGCCATAGAAGCACCGAGCCTCCGTGATC 3739236
Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550
||||| || ||| | ||||| ||| ||||| || || || ||||| || || |||
Sbjct 3739235 TGCACCTCCTGACTGAAGCGCTCCACCAGGTTCTCGTTCACGATGCCATCGGATGCGGCA 3739176
Query 48551 AAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCC 48610
|||||||| || || || | ||| || || |||| || | || | |||| |
Sbjct 3739175 AAGAAGGCCAGCACGTGCGAGATGAAGTGACGTTCGTCGTCCTTCAGGCGGTGCCAGTCG 3739116
Query 48611 TGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657
| ||| ||| ||| ||||| || ||||| |||||||| || ||
Sbjct 3739115 GTCAGGTCCTTGGACAGATCCACCTCCTCCACGGTCCAGAAAGAGGC 3739069
>seq1
Length=22559587
Score = 136 bits (150), Expect = 7e-27
Identities = 742/1158 (64%), Gaps = 44/1158 (4%)
Strand=Plus/Plus
Query 212904 TGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTG 212963
||| |||| || | ||||| || || || || || | ||| |||| || | |||
Sbjct 20041927 TGATGGTTAACCACTTGGAATTCTCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTG 20041986
Query 212964 TAGGGCTCGA-TGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGG 213022
|| ||||||| || | |||||||| |||| ||| || ||||| || |||||||| ||
Sbjct 20041987 TAAGGCTCGAATGAT-TCGTTGTTACCCATAATTTGAGCAGTAGAAGCAGTGGGCATAGG 20042045
Query 213023 AGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGA-AGCT-CTGCC 213080
||| |||| || ||||| || ||||||| |||| | | || || | |||||
Sbjct 20042046 AGCAACCAACAGGGAGTTCCGGACACCGTGCTTCTTGATG-GACTCCTTCAGTTTCTGCC 20042104
Query 213081 CAGTCCCATCTGCCAGACAGGTCCTCGTC-CTTCACGTTCCACATGTCAAACTGCAAGAT 213139
||||||| || | || | | | ||| || ||||||||| |||||| ||
Sbjct 20042105 -AGTCCCAA-----AG---GTTCGTTGGCTCTTT--GTCCCACATGTCGTACTGCAGAAT 20042153
Query 213140 GCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTC 213199
||||||||||||||||| |||| || | || || || | || |||||| ||
Sbjct 20042154 TCCTTTGCTCACGGGGCTTCCCTCATAGGTTTCATATGGACCTTCGATCTGGGCCAGTTC 20042213
Query 213200 GCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTT---GAG--C 213254
|| || | || || |||||||||| ||||| || |||| | || ||| |
Sbjct 20042214 ACAACTGGCTTCCAAAGCGCCGTAGTAGATAGTTTCGAAAATCTGCTGATTCAAGAGGCC 20042273
Query 213255 TTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCC 213314
||| | || | | |||| | | |||| | || | ||||| | |||
Sbjct 20042274 GGCTTCATCACTTT---CAT--AGGGGAACCGCATGAGAATCAAGGCGTCAGCGAATCCC 20042328
Query 213315 TGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGG 213374
||||| |||||||| | ||| | || |||| || || || | ||| || ||||
Sbjct 20042329 TGGACACCGATGCCCACGGGACGATGCCTCAAATTGGATTTCTTGGCCTCTGGCAGGGGG 20042388
Query 213375 TAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCC 213434
|| ||||| ||||| |||||||| || || ||| || ||||| || |
Sbjct 20042389 TAGAAGTTAATATCGATTATCTTGTTAAGATTCTTGGTAACCGTCTTGGTAACTTCCTTA 20042448
Query 213435 AGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTG 213494
|| | || | || | | || | | | || |||||| |||||||||
Sbjct 20042449 AGTTTCTTGAAATCGTAT--GTCTTCTCGGGAGTG-ACAAACATGTTGAGGGCGATGGAT 20042505
Query 213495 GCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGG 213554
|||| ||||||||| || | ||| | | | | ||||| | ||| || |||||||
Sbjct 20042506 GCCAAGTTGCAAACTGCAATCTCATCCGGAGCGGAATACTCTACGATTTCTGTGCACAAA 20042565
Query 213555 TTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTG 213614
||||| || ||||||||| | ||||| ||||| ||| |||| | ||||||
Sbjct 20042566 TTGCTACACTTGATGGTGCCGACATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCCTTA 20042625
Query 213615 TAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGT 213672
| | |||||||||| || || || | ||| | | || || |||| ||| |||
Sbjct 20042626 AACAACATGTAGGGGTTTCCAGTTTCGACCTGTG-CTTCAATAA-TGGCAAACCACAGGG 20042683
Query 213673 ACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCT 213732
| ||||| || | || || || | || || || | || || | ||
Sbjct 20042684 ATTGAGCCTTAACAGTTCTGTTGGCACGACCCTC--TTGC-TCATATTTCTCATACAACT 20042740
Query 213733 CGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGG-ATGCGGGACACATGAGG 213791
| |||||| | |||||| || || || || || || ||| ||| ||||| ||
Sbjct 20042741 TTTCGAATTCATCGCCCCACACATCGTGAAGCCCAGGGCATTTATGTGGG-CACATTAGC 20042799
Query 213792 CTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTG 213851
||| || || | | ||| | || ||| || || || || | |||||| |||
Sbjct 20042800 GACCAATCTCCATTGGCCTCGACGCGCTTCATAAAGAGATCGGGTATCCACAGGGCGTAA 20042859
Query 213852 AACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCA 213911
||||| || | || || | || ||| || | |||||| || || || || |||
Sbjct 20042860 AACAGATCGCGGGCCCGATTTTCCTCCTTGCCGGTGTTTTTCTTAAGTTCCAGGAACTCA 20042919
Query 213912 AAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCG 213968
|||| |||| |||||| ||||||| ||| ||||||||||| || || | |||| ||
Sbjct 20042920 AAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCCACCT 20042979
Query 213969 CCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTG 214028
|| || ||||| | ||||| ||||||||| | || | ||| |||| || |||
Sbjct 20042980 CCTTGATCCACATAACGCGCCACATTGTTGAAGACCCTCAACATGGGAACCAAGCCATTG 20043039
Query 214029 GACTGT-CCGTTGGTTCC 214045
|| ||| || || |||||
Sbjct 20043040 GA-TGTGCCATTCGTTCC 20043056
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931431728691200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |