Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq3275 114 1e-20
>seq3275
Length=287013
Score = 114 bits (126), Expect = 1e-20
Identities = 201/283 (71%), Gaps = 10/283 (4%)
Strand=Plus/Minus
Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322
|| || | |||||| || ||||| | | |||||||| || || || || || ||
Sbjct 260800 CCCTCGGGACCATGGTAAATGGCATACATGGCCGACATATTGGCCAGAAGAGCCTGAGCC 260741
Query 139323 GTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCT 139382
|||||||||||||| || || |||||||||| || ||||||||||| ||||| || ||
Sbjct 260740 GTGCAGATGTTACTCGTGGCCTTGTCTCTTCGGATGTGCTGCTCTCTGGTTTGCAGGGCC 260681
Query 139383 AATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGA--CCTACAATTCTGCCAGGTA 139440
|||| ||| ||| ||| || || ||||| ||| ||| || | || ||||| || |
Sbjct 260680 AATCGGTAGGCATCATTTCCGTCCATGTCC-CTG-GTGACCCCGATCATCCTGCCGGGCA 260623
Query 139441 TCTTTCTC-TTATACT-TGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCC 139498
|| | | | ||| ||| || | || |||||| ||||||| || || || || ||
Sbjct 260622 TCAAGCGCACCAAACTCTGTTTGCAG--GCGAAGAATCCAGCATGGGGTCCACCATAGCC 260565
Query 139499 CATAGGAA-TACCAAACCTTTGCATACTACCTACAGCAATATC 139540
|| ||||| | ||| || | | | | | || |||||||||||
Sbjct 260564 CAGAGGAACTCCCAGACGCTGGGA-AGTTCCCACAGCAATATC 260523
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578935578673600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |