Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq5978 168 8e-36
seq786 161 1e-33
seq7694 127 2e-23
seq4563 123 3e-22
seq1 104 3e-16
>seq5978
Length=4749261
Score = 168 bits (186), Expect = 8e-36
Identities = 154/192 (80%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 1592106 AGAAGCGCACCGACGACATC-TCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCC 1592164
|||||||||||||||||||| || || |||||| || || | ||||| ||| |
Sbjct 3070264 AGAAGCGCACCGACGACATCATCTCC-TGGGACGCCGACTTCCTGAAGGTCGATCAGGGC 3070322
Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224
|| || || ||| | ||||| ||||||||||| || ||||||||| ||||| || ||
Sbjct 3070323 ACTCTGTTCGAGCTCATCCTGGCCGCCAACTATCTGGACATCAAGGGCCTGCTGGAGCTC 3070382
Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284
|||||| | |||||||||||||||||||||||| | |||||||||||||| ||||||
Sbjct 3070383 ACCTGCAAGACGGTGGCCAACATGATCAAGGGCAAGACACCCGAGGAGATCCGTAAGACC 3070442
Query 1592285 TTTAACATCAAG 1592296
||||||||||||
Sbjct 3070443 TTTAACATCAAG 3070454
Score = 93.3 bits (102), Expect = 5e-13
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 507735 CCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACGTGCCCCAGTCCGAGACGG 507794
||||||||||||| ||||||||||||||||||||||||||||| || |||||| | |
Sbjct 3458469 CCTACAACGCCGATTTTGACGGCGACGAGATGAACCTGCACGTCCCGCAGTCCATGGAGA 3458528
Query 507795 CGCGCGCCGAGGTG 507808
|||| |||||||||
Sbjct 3458529 CGCGTGCCGAGGTG 3458542
>seq786
Length=282367
Score = 161 bits (178), Expect = 1e-33
Identities = 368/547 (67%), Gaps = 14/547 (3%)
Strand=Plus/Minus
Query 1852117 GTGGAAGCGCTTCCGATAGCCGAGGACCGGCAGGTGGTCGCGCGCAAAGGCAAATATCTT 1852176
||||| ||| ||| ||||| | |||||||| | || |||| || |||||
Sbjct 271732 GTGGATGCGTTTCTCGTAGCCCAACTGCGGCAGGTACTTCTCCGAGAAGGTGAAGATCTT 271673
Query 1852177 GCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTG 1852236
||||||||| || || ||||||||||| || | ||||| || |||||| ||||||||
Sbjct 271672 GCGCTGGTCTACGCCACCGAACTGGGCGTCCACCTTGAGGTACTCCTCGTCCAGGGCCTG 271613
Query 1852237 CATGAGCGGGTAGAGCACGTTGCTCAG-GAGCGGGTTGCGGTCCATC---TTGACCACCT 1852292
|| | |||||||||| | ||| |||| || | |||| | ||||||||||
Sbjct 271612 CAGGCCGGGGTAGAGCA----GTCCAGAGAGCAGGGGGTACTCCACCTGTTTGACCACCT 271557
Query 1852293 GAGCGGCGGCCT--TTTGCGCCGTGCCG-GTGCGCACGTGCGCCGCGAGTCGGTAGAGGT 1852349
||| | |||| ||||| ||||| | ||| |||| | || ||| ||||| |
Sbjct 271556 CGGCGCCCGCCTTCTTTGCATCGTGCTGCGTGACCACG-GAGC--TTAGTTTGTAGACAT 271500
Query 1852350 CGAGCGCGTAGGCGCCGCCGCACTGGTACTCGGTGCCGCGCACAAACTCGAGTCCGCCCA 1852409
| || | ||| | | |||| || ||| | || ||||||| || |||
Sbjct 271499 CCAGGGTGTATTCCTTGGACAACTGATAGTCGCTACCCTTGACAAACTTCAGCTTCTCCA 271440
Query 1852410 GCGGCACGCCGATGTGCTGGAGCATGGCCTTGATGGCAAACTCGTACCAGCGGCACCGGT 1852469
| |||||||| ||| ||||||||||||||| | |||||| | | ||
Sbjct 271439 GTGGCACGCCAATGGAACTCAGCATGGCCTTGATGACCTGCTCGTAGTACTGAGTGCGCA 271380
Query 1852470 GTTCGACCAGGTCCCACGGCGTCTTGCCGTTGTCGAGGTGGGCGTGCACGTCGGCAAAGA 1852529
| || | ||| ||| |||| ||| |||||| || | ||| || | ||||||||| |
Sbjct 271379 GCTCCAGCAGAGACCAGGGCGCCTTCATGTTGTCCAGATAGGCATGGAGGTCGGCAAACA 271320
Query 1852530 GGATCTTGACCCGACAGCCGGCCTGGAGAAAGTCGGCCAGTTTGAAGATGGGCACAAAGT 1852589
||||| | ||| || || |||| || || ||||| | || | |||||||| ||||
Sbjct 271319 GGATCGTCACCTCGCATCCTGCCTTCAGGAAATCGGCAATCTTTGACATGGGCACGAAGT 271260
Query 1852590 AGCCTAGGTGCGGGTTGCCCGTCGGCGCCGTGCCCCAATATATGATCAGGGGGCGCTCGG 1852649
|| | | || || |||||||||| |||||| ||||| || || |||| ||||| |
Sbjct 271259 AGGCGACATGTGGCTTGCCCGTCGTCGCCGTTCCCCAGTAGATCTTCAGATCCCGCTCCG 271200
Query 1852650 CCATGAT 1852656
||| |||
Sbjct 271199 CCAGGAT 271193
>seq7694
Length=285784
Score = 127 bits (140), Expect = 2e-23
Identities = 241/349 (69%), Gaps = 8/349 (2%)
Strand=Plus/Minus
Query 1573895 GGGTCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGG 1573954
|||||| || ||| |||||||||||| | |||| |||||||||| | ||||| ||||
Sbjct 61079 GGGTCCTCCTGGCGTGGGCAAGACCACCACCATCCAGTGTCTGGCGAGGATCCTCCTGGG 61020
Query 1573955 CGCGGCCGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGT 1574014
| | | |||||||| ||||| | ||||| || | ||||| || |||| ||
Sbjct 61019 AGATAGCTATAAGGAGGCCGTCCTCGAGTTAAACGCCTCCAATGAGCGAGGTATCGATGT 60960
Query 1574015 CGTGCGCAAGATCATCAAGCACCACGCCTC-CAAGAGGATCGAC-CTGCCGCCCGGACGC 1574072
|||||||| | |||||| ||| ||| ||| ||| ||||| | |||| |
Sbjct 60959 GGTGCGCAATAAGATCAAGATGTTTGCCCAGCAAAAGGT--GACGCTGCCCCGCGGAAGG 60902
Query 1574073 CACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTG 1574132
|| ||| | | |||||||||||||| ||| || | || || |||||||| ||| ||
Sbjct 60901 CATAAGATTGTGATCCTCGACGAGGCGGACAGCATGACAGAGGGTGCCCAGCAAGCCTTG 60842
Query 1574133 CGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCG 1574192
|| ||||||||| | | | | ||| ||| | || ||| |||| ||||||||
Sbjct 60841 CGCCGCACCATGGAGATCTATAGTAGCACCACGAGATTCGCCTTGGCCTGCAACACCAGC 60782
Query 1574193 TCGATGGTCATCGAGGCCCTCCAAAGTCGC--TGCGCCATTCTGCGCTT 1574239
|| | |||| || || ||| |||||| || ||||| ||||| ||
Sbjct 60781 GAGAAGATCATTGAACCCATCC--AGTCGCGATGTGCCATGCTGCGATT 60735
>seq4563
Length=14502029
Score = 123 bits (136), Expect = 3e-22
Identities = 170/235 (72%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690
||||||| | |||||| |||||||| |||||||| || ||| || |||| | | |
Sbjct 3739294 CCGAGTGCACGTTCTCCATGGCGATTTGGAAGCCATAGAAGCACCGAGCCTCCGTGATCT 3739235
Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750
| ||||||| |||| || | ||||||||||| ||||||||| ||| ||||| |
Sbjct 3739234 GCACCTCCTGACTGAAGCGCTCCACCAGGTTCTCGTTCACGATGCCATCGGATGCGGCAA 3739175
Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGT-GG 869809
| || ||||| |||||| ||| ||||| || |||||||| | || ||||| ||
Sbjct 3739174 AGAAGGCCAGCACGTGCGAGATGAAGTGACGTTCGTCGTCCTTCAGGCGGTGCCAGTCGG 3739115
Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCT 869864
| | ||| | || ||||||||||| ||||||||| |||||||| ||||
Sbjct 3739114 TCAG-GTCCTTGGACAGATCCACCTCCTCCACGGTCCAGAAAGAGGCCTCAGCCT 3739061
Score = 116 bits (128), Expect = 5e-20
Identities = 139/189 (74%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165
|||||||||| || ||||| || | ||||| || || | | || || ||| ||
Sbjct 3561544 AGAAGCGCACGGATGACATTTCATCCTGGGATGCCGACTTCCTCAAGGTGGACCAGGGCA 3561603
Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225
|||| || ||| |||||||||| || |||||||| ||||| || ||||| || |
Sbjct 3561604 CCCTGTTCGAGCTGATCCTCGCTGCGAACTACCTGAACATCCAGGGCCTGCTGGACGTCA 3561663
Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285
|||||| | |||||||| ||||||||||||||| |||| |||| |||||| | ||||
Sbjct 3561664 CTTGCAAGACGGTGGCCAATATGATCAAGGGCAAGACGCCGCAGGACATCCGCGACACCT 3561723
Query 1592286 TTAACATCA 1592294
| |||||
Sbjct 3561724 TCGCCATCA 3561732
Score = 100 bits (110), Expect = 3e-15
Identities = 200/294 (68%), Gaps = 8/294 (3%)
Strand=Plus/Minus
Query 869156 ACGGCAAAGAGGGCACTATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCG 869215
||||||||| | | |||| | || |||||||| ||| | |||||| ||||
Sbjct 3739595 ACGGCAAAGTCG---CAATGCAAGCCCTCGTCGCGGGAGATAAGCTCGTTGGAGAAGGTC 3739539
Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAA 869275
|| || ||||| || ||||||||||| ||||| || |||| | || ||||| |||
Sbjct 3739538 AGTCCCGGCATCAGACCGCGCTTCTTCAGCCAGAAAATGGAGGCAAAGCTGCCGCTGAAG 3739479
Query 869276 AAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGC-AAAGGTGTCGAGGCCCTC 869334
||||||||||||||||| || ||| | |||| ||||| | ||| | ||| |
Sbjct 3739478 AAGATGCCCTCGACGGCAGCGAAGGCAATGATGCGCTCCCCGAAATTGGCCGA----TTT 3739423
Query 869335 CTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGAT 869394
| |||||| | |||||||| ||||| | |||| | ||||| || |||||
Sbjct 3739422 GGAGGAGATCCAGGAAAGGGCCCAGTCCGCCTTGCGCTTCACAGCCGGCATTGTCTCGAT 3739363
Query 869395 GGCGCGAAAGAGGTGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAG 869448
|||| || |||| |||| | ||| ||| || || |||||||||||
Sbjct 3739362 GGCGTTGAACAGGTAGTCCCGCTGATGCGGATCCCGGATGTAAGTGTCGATCAG 3739309
Score = 86.0 bits (94), Expect = 8e-11
Identities = 163/238 (68%), Gaps = 4/238 (2%)
Strand=Plus/Minus
Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758
|||||||||||| | ||| || ||||| ||||| || || |||||||||| ||||||
Sbjct 3739881 GTACTCGCCCACCTTCTTCTCAAAGAAGTTCGTCTTTCCGTCCAGCGAGATCATCTCCAT 3739822
Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCG--AGCGACGCGAGCAGG 868816
| || ||||| || |||||| |||| || | | | | | |||||
Sbjct 3739821 GAAGTTAAAGGGGTTCTTGGTATTGTAGA--TTTTGCCAACGCTCAACTCCACCAGCAGT 3739764
Query 868817 CGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCC 868876
||||| || || || || |||||||| |||| || || |||||||||||||||
Sbjct 3739763 CGGTCCGCCACGAATTCAATGTACTGCGACATAAGATCGCAGTTCATGCCGATGAGGTTT 3739704
Query 868877 ACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCT 868934
|| |||| | ||| | | ||||| | ||| || | || || ||| ||||||||
Sbjct 3739703 ACGGGCAAGGCATCGGTTAAGAACTCCTGCTCAATGGCCACCGCATCGCGGATGATCT 3739646
>seq1
Length=22559587
Score = 104 bits (114), Expect = 3e-16
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 1628416 AGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCACACGTCCACAGTGCG 1628475
|||||||| || ||| || | | |||| ||||||||| || ||||||| |||
Sbjct 20042797 AGCGACCAATCTCCATTGGCCTCGACGCGCTTCATAAAGAGATCGGGTATCCACAGGGCG 20042856
Query 1628476 TAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAG 1628535
||||| || ||||| ||||| || |||||||||||| ||| || || || || || |
Sbjct 20042857 TAAAACAGATCGCGGGCCCGATTTTCCTCCTTGCCGGTGTTTTTCTTAAGTTCCAGGAAC 20042916
Query 1628536 TCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCG 1628595
|| | | || | |||||| ||||||||||| ||||||||| || ||||||||
Sbjct 20042917 TCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCCA 20042976
Query 1628596 CCGCC 1628600
|| ||
Sbjct 20042977 CCTCC 20042981
Score = 96.9 bits (106), Expect = 4e-14
Identities = 182/265 (69%), Gaps = 7/265 (3%)
Strand=Plus/Minus
Query 1572380 CCGGTCGAGCCAAAGCCGCCGCTGCCGCGCTCGGTGTCGTCCAGCGAGTCGACCCACTCG 1572439
|| || || ||||| || || ||||||||||||||| |||||| ||| ||| |||
Sbjct 20854256 CCCGTGGAACCAAATCCTCCCTCGCCGCGCTCGGTGTCCTCCAGCTTGTCCACCAACTGC 20854197
Query 1572440 GGCTCGGGTTGGGCAATCTTTTCGATGAGCAACTGGGCGATGCG--CGCCTCGCCCTGGA 1572497
| || || | | || |||| | |||||||| ||||| |||| || || |
Sbjct 20854196 AGTTCCGGATAGAAGATGCGTTCGCAAATGAACTGGGCAATGCGGTCGCCACG--CTTCA 20854139
Query 1572498 CAACGTGGTCGGCGTCGGTGTGGTTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCGG 1572557
| || || |||| | ||| |||||||| |||||||| | | |||||| |||||
Sbjct 20854138 CCTCGAACTCCACGTCCGAGTGATTGAAGAGGACGACGCCAAGGTTGCCGCGGTAGTCCT 20854079
Query 1572558 CATCGATGACGCCTGCGCCGACGTCGAT---GCCCCTGACGGCCAGGGACGAGCGCGGCG 1572614
| || | ||||| || || || ||||| | | | |||||||| || ||||| |
Sbjct 20854078 CGTCCACCACGCCGGCACCCACATCGATGAAGTTCTTTACGGCCAGTCCAGATCGCGGGG 20854019
Query 1572615 CCACGCGCCCATAGTAGCCCGCGGG 1572639
|||| || || ||| ||||| ||||
Sbjct 20854018 CCACCCGTCCGTAGGAGCCCTCGGG 20853994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106426878551560
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