Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq5978 168 8e-36 seq786 161 1e-33 seq7694 127 2e-23 seq4563 123 3e-22 seq1 104 3e-16 >seq5978 Length=4749261 Score = 168 bits (186), Expect = 8e-36 Identities = 154/192 (80%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 1592106 AGAAGCGCACCGACGACATC-TCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCC 1592164 |||||||||||||||||||| || || |||||| || || | ||||| ||| | Sbjct 3070264 AGAAGCGCACCGACGACATCATCTCC-TGGGACGCCGACTTCCTGAAGGTCGATCAGGGC 3070322 Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || || || ||| | ||||| ||||||||||| || ||||||||| ||||| || || Sbjct 3070323 ACTCTGTTCGAGCTCATCCTGGCCGCCAACTATCTGGACATCAAGGGCCTGCTGGAGCTC 3070382 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| | |||||||||||||||||||||||| | |||||||||||||| |||||| Sbjct 3070383 ACCTGCAAGACGGTGGCCAACATGATCAAGGGCAAGACACCCGAGGAGATCCGTAAGACC 3070442 Query 1592285 TTTAACATCAAG 1592296 |||||||||||| Sbjct 3070443 TTTAACATCAAG 3070454 Score = 93.3 bits (102), Expect = 5e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 507735 CCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACGTGCCCCAGTCCGAGACGG 507794 ||||||||||||| ||||||||||||||||||||||||||||| || |||||| | | Sbjct 3458469 CCTACAACGCCGATTTTGACGGCGACGAGATGAACCTGCACGTCCCGCAGTCCATGGAGA 3458528 Query 507795 CGCGCGCCGAGGTG 507808 |||| ||||||||| Sbjct 3458529 CGCGTGCCGAGGTG 3458542 >seq786 Length=282367 Score = 161 bits (178), Expect = 1e-33 Identities = 368/547 (67%), Gaps = 14/547 (3%) Strand=Plus/Minus Query 1852117 GTGGAAGCGCTTCCGATAGCCGAGGACCGGCAGGTGGTCGCGCGCAAAGGCAAATATCTT 1852176 ||||| ||| ||| ||||| | |||||||| | || |||| || ||||| Sbjct 271732 GTGGATGCGTTTCTCGTAGCCCAACTGCGGCAGGTACTTCTCCGAGAAGGTGAAGATCTT 271673 Query 1852177 GCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTG 1852236 ||||||||| || || ||||||||||| || | ||||| || |||||| |||||||| Sbjct 271672 GCGCTGGTCTACGCCACCGAACTGGGCGTCCACCTTGAGGTACTCCTCGTCCAGGGCCTG 271613 Query 1852237 CATGAGCGGGTAGAGCACGTTGCTCAG-GAGCGGGTTGCGGTCCATC---TTGACCACCT 1852292 || | |||||||||| | ||| |||| || | |||| | |||||||||| Sbjct 271612 CAGGCCGGGGTAGAGCA----GTCCAGAGAGCAGGGGGTACTCCACCTGTTTGACCACCT 271557 Query 1852293 GAGCGGCGGCCT--TTTGCGCCGTGCCG-GTGCGCACGTGCGCCGCGAGTCGGTAGAGGT 1852349 ||| | |||| ||||| ||||| | ||| |||| | || ||| ||||| | Sbjct 271556 CGGCGCCCGCCTTCTTTGCATCGTGCTGCGTGACCACG-GAGC--TTAGTTTGTAGACAT 271500 Query 1852350 CGAGCGCGTAGGCGCCGCCGCACTGGTACTCGGTGCCGCGCACAAACTCGAGTCCGCCCA 1852409 | || | ||| | | |||| || ||| | || ||||||| || ||| Sbjct 271499 CCAGGGTGTATTCCTTGGACAACTGATAGTCGCTACCCTTGACAAACTTCAGCTTCTCCA 271440 Query 1852410 GCGGCACGCCGATGTGCTGGAGCATGGCCTTGATGGCAAACTCGTACCAGCGGCACCGGT 1852469 | |||||||| ||| ||||||||||||||| | |||||| | | || Sbjct 271439 GTGGCACGCCAATGGAACTCAGCATGGCCTTGATGACCTGCTCGTAGTACTGAGTGCGCA 271380 Query 1852470 GTTCGACCAGGTCCCACGGCGTCTTGCCGTTGTCGAGGTGGGCGTGCACGTCGGCAAAGA 1852529 | || | ||| ||| |||| ||| |||||| || | ||| || | ||||||||| | Sbjct 271379 GCTCCAGCAGAGACCAGGGCGCCTTCATGTTGTCCAGATAGGCATGGAGGTCGGCAAACA 271320 Query 1852530 GGATCTTGACCCGACAGCCGGCCTGGAGAAAGTCGGCCAGTTTGAAGATGGGCACAAAGT 1852589 ||||| | ||| || || |||| || || ||||| | || | |||||||| |||| Sbjct 271319 GGATCGTCACCTCGCATCCTGCCTTCAGGAAATCGGCAATCTTTGACATGGGCACGAAGT 271260 Query 1852590 AGCCTAGGTGCGGGTTGCCCGTCGGCGCCGTGCCCCAATATATGATCAGGGGGCGCTCGG 1852649 || | | || || |||||||||| |||||| ||||| || || |||| ||||| | Sbjct 271259 AGGCGACATGTGGCTTGCCCGTCGTCGCCGTTCCCCAGTAGATCTTCAGATCCCGCTCCG 271200 Query 1852650 CCATGAT 1852656 ||| ||| Sbjct 271199 CCAGGAT 271193 >seq7694 Length=285784 Score = 127 bits (140), Expect = 2e-23 Identities = 241/349 (69%), Gaps = 8/349 (2%) Strand=Plus/Minus Query 1573895 GGGTCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGG 1573954 |||||| || ||| |||||||||||| | |||| |||||||||| | ||||| |||| Sbjct 61079 GGGTCCTCCTGGCGTGGGCAAGACCACCACCATCCAGTGTCTGGCGAGGATCCTCCTGGG 61020 Query 1573955 CGCGGCCGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGT 1574014 | | | |||||||| ||||| | ||||| || | ||||| || |||| || Sbjct 61019 AGATAGCTATAAGGAGGCCGTCCTCGAGTTAAACGCCTCCAATGAGCGAGGTATCGATGT 60960 Query 1574015 CGTGCGCAAGATCATCAAGCACCACGCCTC-CAAGAGGATCGAC-CTGCCGCCCGGACGC 1574072 |||||||| | |||||| ||| ||| ||| ||| ||||| | |||| | Sbjct 60959 GGTGCGCAATAAGATCAAGATGTTTGCCCAGCAAAAGGT--GACGCTGCCCCGCGGAAGG 60902 Query 1574073 CACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTG 1574132 || ||| | | |||||||||||||| ||| || | || || |||||||| ||| || Sbjct 60901 CATAAGATTGTGATCCTCGACGAGGCGGACAGCATGACAGAGGGTGCCCAGCAAGCCTTG 60842 Query 1574133 CGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCG 1574192 || ||||||||| | | | | ||| ||| | || ||| |||| |||||||| Sbjct 60841 CGCCGCACCATGGAGATCTATAGTAGCACCACGAGATTCGCCTTGGCCTGCAACACCAGC 60782 Query 1574193 TCGATGGTCATCGAGGCCCTCCAAAGTCGC--TGCGCCATTCTGCGCTT 1574239 || | |||| || || ||| |||||| || ||||| ||||| || Sbjct 60781 GAGAAGATCATTGAACCCATCC--AGTCGCGATGTGCCATGCTGCGATT 60735 >seq4563 Length=14502029 Score = 123 bits (136), Expect = 3e-22 Identities = 170/235 (72%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||| | |||||| |||||||| |||||||| || ||| || |||| | | | Sbjct 3739294 CCGAGTGCACGTTCTCCATGGCGATTTGGAAGCCATAGAAGCACCGAGCCTCCGTGATCT 3739235 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | ||||||| |||| || | ||||||||||| ||||||||| ||| ||||| | Sbjct 3739234 GCACCTCCTGACTGAAGCGCTCCACCAGGTTCTCGTTCACGATGCCATCGGATGCGGCAA 3739175 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGT-GG 869809 | || ||||| |||||| ||| ||||| || |||||||| | || ||||| || Sbjct 3739174 AGAAGGCCAGCACGTGCGAGATGAAGTGACGTTCGTCGTCCTTCAGGCGGTGCCAGTCGG 3739115 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCT 869864 | | ||| | || ||||||||||| ||||||||| |||||||| |||| Sbjct 3739114 TCAG-GTCCTTGGACAGATCCACCTCCTCCACGGTCCAGAAAGAGGCCTCAGCCT 3739061 Score = 116 bits (128), Expect = 5e-20 Identities = 139/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165 |||||||||| || ||||| || | ||||| || || | | || || ||| || Sbjct 3561544 AGAAGCGCACGGATGACATTTCATCCTGGGATGCCGACTTCCTCAAGGTGGACCAGGGCA 3561603 Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225 |||| || ||| |||||||||| || |||||||| ||||| || ||||| || | Sbjct 3561604 CCCTGTTCGAGCTGATCCTCGCTGCGAACTACCTGAACATCCAGGGCCTGCTGGACGTCA 3561663 Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285 |||||| | |||||||| ||||||||||||||| |||| |||| |||||| | |||| Sbjct 3561664 CTTGCAAGACGGTGGCCAATATGATCAAGGGCAAGACGCCGCAGGACATCCGCGACACCT 3561723 Query 1592286 TTAACATCA 1592294 | ||||| Sbjct 3561724 TCGCCATCA 3561732 Score = 100 bits (110), Expect = 3e-15 Identities = 200/294 (68%), Gaps = 8/294 (3%) Strand=Plus/Minus Query 869156 ACGGCAAAGAGGGCACTATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCG 869215 ||||||||| | | |||| | || |||||||| ||| | |||||| |||| Sbjct 3739595 ACGGCAAAGTCG---CAATGCAAGCCCTCGTCGCGGGAGATAAGCTCGTTGGAGAAGGTC 3739539 Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAA 869275 || || ||||| || ||||||||||| ||||| || |||| | || ||||| ||| Sbjct 3739538 AGTCCCGGCATCAGACCGCGCTTCTTCAGCCAGAAAATGGAGGCAAAGCTGCCGCTGAAG 3739479 Query 869276 AAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGC-AAAGGTGTCGAGGCCCTC 869334 ||||||||||||||||| || ||| | |||| ||||| | ||| | ||| | Sbjct 3739478 AAGATGCCCTCGACGGCAGCGAAGGCAATGATGCGCTCCCCGAAATTGGCCGA----TTT 3739423 Query 869335 CTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGAT 869394 | |||||| | |||||||| ||||| | |||| | ||||| || ||||| Sbjct 3739422 GGAGGAGATCCAGGAAAGGGCCCAGTCCGCCTTGCGCTTCACAGCCGGCATTGTCTCGAT 3739363 Query 869395 GGCGCGAAAGAGGTGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAG 869448 |||| || |||| |||| | ||| ||| || || ||||||||||| Sbjct 3739362 GGCGTTGAACAGGTAGTCCCGCTGATGCGGATCCCGGATGTAAGTGTCGATCAG 3739309 Score = 86.0 bits (94), Expect = 8e-11 Identities = 163/238 (68%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 |||||||||||| | ||| || ||||| ||||| || || |||||||||| |||||| Sbjct 3739881 GTACTCGCCCACCTTCTTCTCAAAGAAGTTCGTCTTTCCGTCCAGCGAGATCATCTCCAT 3739822 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCG--AGCGACGCGAGCAGG 868816 | || ||||| || |||||| |||| || | | | | | ||||| Sbjct 3739821 GAAGTTAAAGGGGTTCTTGGTATTGTAGA--TTTTGCCAACGCTCAACTCCACCAGCAGT 3739764 Query 868817 CGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCC 868876 ||||| || || || || |||||||| |||| || || ||||||||||||||| Sbjct 3739763 CGGTCCGCCACGAATTCAATGTACTGCGACATAAGATCGCAGTTCATGCCGATGAGGTTT 3739704 Query 868877 ACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCT 868934 || |||| | ||| | | ||||| | ||| || | || || ||| |||||||| Sbjct 3739703 ACGGGCAAGGCATCGGTTAAGAACTCCTGCTCAATGGCCACCGCATCGCGGATGATCT 3739646 >seq1 Length=22559587 Score = 104 bits (114), Expect = 3e-16 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 1628416 AGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCACACGTCCACAGTGCG 1628475 |||||||| || ||| || | | |||| ||||||||| || ||||||| ||| Sbjct 20042797 AGCGACCAATCTCCATTGGCCTCGACGCGCTTCATAAAGAGATCGGGTATCCACAGGGCG 20042856 Query 1628476 TAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAG 1628535 ||||| || ||||| ||||| || |||||||||||| ||| || || || || || | Sbjct 20042857 TAAAACAGATCGCGGGCCCGATTTTCCTCCTTGCCGGTGTTTTTCTTAAGTTCCAGGAAC 20042916 Query 1628536 TCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCG 1628595 || | | || | |||||| ||||||||||| ||||||||| || |||||||| Sbjct 20042917 TCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCCA 20042976 Query 1628596 CCGCC 1628600 || || Sbjct 20042977 CCTCC 20042981 Score = 96.9 bits (106), Expect = 4e-14 Identities = 182/265 (69%), Gaps = 7/265 (3%) Strand=Plus/Minus Query 1572380 CCGGTCGAGCCAAAGCCGCCGCTGCCGCGCTCGGTGTCGTCCAGCGAGTCGACCCACTCG 1572439 || || || ||||| || || ||||||||||||||| |||||| ||| ||| ||| Sbjct 20854256 CCCGTGGAACCAAATCCTCCCTCGCCGCGCTCGGTGTCCTCCAGCTTGTCCACCAACTGC 20854197 Query 1572440 GGCTCGGGTTGGGCAATCTTTTCGATGAGCAACTGGGCGATGCG--CGCCTCGCCCTGGA 1572497 | || || | | || |||| | |||||||| ||||| |||| || || | Sbjct 20854196 AGTTCCGGATAGAAGATGCGTTCGCAAATGAACTGGGCAATGCGGTCGCCACG--CTTCA 20854139 Query 1572498 CAACGTGGTCGGCGTCGGTGTGGTTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCGG 1572557 | || || |||| | ||| |||||||| |||||||| | | |||||| ||||| Sbjct 20854138 CCTCGAACTCCACGTCCGAGTGATTGAAGAGGACGACGCCAAGGTTGCCGCGGTAGTCCT 20854079 Query 1572558 CATCGATGACGCCTGCGCCGACGTCGAT---GCCCCTGACGGCCAGGGACGAGCGCGGCG 1572614 | || | ||||| || || || ||||| | | | |||||||| || ||||| | Sbjct 20854078 CGTCCACCACGCCGGCACCCACATCGATGAAGTTCTTTACGGCCAGTCCAGATCGCGGGG 20854019 Query 1572615 CCACGCGCCCATAGTAGCCCGCGGG 1572639 |||| || || ||| ||||| |||| Sbjct 20854018 CCACCCGTCCGTAGGAGCCCTCGGG 20853994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106426878551560