Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq786 167 4e-35 seq5978 147 3e-29 seq5955 132 8e-25 seq5896 132 8e-25 seq4563 122 1e-21 seq1 111 2e-18 >seq786 Length=282367 Score = 167 bits (184), Expect = 4e-35 Identities = 368/546 (67%), Gaps = 12/546 (2%) Strand=Plus/Minus Query 2411460 GTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCAAAGGCAAAGATCTT 2411519 ||||||||| || |||||||| | |||||||| | || |||| |||||||| Sbjct 271732 GTGGATGCGTTTCTCGTAGCCCAACTGCGGCAGGTACTTCTCCGAGAAGGTGAAGATCTT 271673 Query 2411520 GCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTG 2411579 ||||||||| || || ||||||||||| || | ||||| || |||||| |||||||| Sbjct 271672 GCGCTGGTCTACGCCACCGAACTGGGCGTCCACCTTGAGGTACTCCTCGTCCAGGGCCTG 271613 Query 2411580 CATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTTGCGGTCCATCT---TGACCACCTG 2411636 || | ||||||| || |||| | |||| |||| || ||||||||| Sbjct 271612 CAGGCCGGGGTAGAGCAGTCCAGAGAGCAGGGGGTAC---TCCACCTGTTTGACCACCTC 271556 Query 2411637 GGCGGCGGCCTT--TTGCGCCGTGCCGACGGTC-ACGCGCGCCGTCAGGCGCAAGAGGTC 2411693 |||| | ||||| |||| ||||| | | | ||| | || | || ||| || Sbjct 271555 GGCGCCCGCCTTCTTTGCATCGTGCTGCGTGACCACG-GAGC--TTAGTTTGTAGACATC 271499 Query 2411694 GAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCACAAATTCGAGACGATCCAG 2411753 || ||||| | | ||| || ||||| || ||||| | || ||||| Sbjct 271498 CAGGGTGTATTCCTTGGACAACTGATAGTCGCTACCCTTGACAAACTTCAGCTTCTCCAG 271439 Query 2411754 CGGGACGCCAATGTGCTGGAGCATGGCCTTGATGGCAAACTCGTACCAGCGGCACCGGTG 2411813 || ||||||||| ||||||||||||||| | |||||| | | || | Sbjct 271438 TGGCACGCCAATGGAACTCAGCATGGCCTTGATGACCTGCTCGTAGTACTGAGTGCGCAG 271379 Query 2411814 CTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGGCGTGCACGTCGGCAAAGAG 2411873 ||| | || ||| |||| ||| ||||| || | ||| || | ||||||||| || Sbjct 271378 CTCCAGCAGAGACCAGGGCGCCTTCATGTTGTCCAGATAGGCATGGAGGTCGGCAAACAG 271319 Query 2411874 GATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTTAAAGATGGGCACAAAGTA 2411933 |||| ||||| ||||| |||| || || ||||| | || | |||||||| ||||| Sbjct 271318 GATCGTCACCTCGCATCCTGCCTTCAGGAAATCGGCAATCTTTGACATGGGCACGAAGTA 271259 Query 2411934 GCCCAGATGGGGCTTGCCCGTCGGCGCGGTGCCCCAATAAATGCAGAGAGGGCGCTCGGC 2411993 | | | ||| ||||||||||||| ||| || ||||| || || ||| ||||| || Sbjct 271258 GGCGACATGTGGCTTGCCCGTCGTCGCCGTTCCCCAGTAGATCTTCAGATCCCGCTCCGC 271199 Query 2411994 CATGAT 2411999 || ||| Sbjct 271198 CAGGAT 271193 >seq5978 Length=4749261 Score = 147 bits (162), Expect = 3e-29 Identities = 150/193 (78%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 2035566 GACAAGCGCACCGACGACATT-TCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACC 2035624 || ||||||||||||||||| || || |||||| | ||| ||||||| || Sbjct 3070263 GAGAAGCGCACCGACGACATCATCTCC-TGGGACGCCGACTTCCTGAAGGTCGATCAGGG 3070321 Query 2035625 CACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTT 2035684 ||| || || ||| | ||||| ||||||||||| || ||||||||| ||| || || | Sbjct 3070322 CACTCTGTTCGAGCTCATCCTGGCCGCCAACTATCTGGACATCAAGGGCCTGCTGGAGCT 3070381 Query 2035685 GGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGAC 2035744 |||||||| ||||||||| | |||||||||||| | |||||||| ||||| ||||| Sbjct 3070382 CACCTGCAAGACGGTGGCCAACATGATCAAGGGCAAGACACCCGAGGAGATCCGTAAGAC 3070441 Query 2035745 CTTTAACATCAAG 2035757 ||||||||||||| Sbjct 3070442 CTTTAACATCAAG 3070454 Score = 96.9 bits (106), Expect = 5e-14 Identities = 141/193 (73%), Gaps = 10/193 (5%) Strand=Plus/Plus Query 429528 GTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAACCGGCAGCCGTCGCTCCAC 429587 || ||||| ||| ||||| || ||| | ||| || | ||||| ||||| |||| ||| Sbjct 3458333 GTGGAGCGGCACTTGCGCGACGACGATCTGGTGATCTTCAACCGACAGCCCACGCTGCAC 3458392 Query 429588 ATGGGGTCGATGCTCAACCACAAGGTG---GTGCCCATGCCC-GGTCGCACCTTCCGGCT 429643 | | | ||| | |||| |||| |||| ||||| ||||| || ||||| | Sbjct 3458393 AAGATGAGTATGATGGGGCACAGGGTGAAAGTGC---TGCCCTGGTCG-ACGTTCCGCAT 3458448 Query 429644 CAACCTGGCCGTG-ACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGC 429702 ||||| | ||| || ||||||||||||| ||||||||||||||||||||||||| Sbjct 3458449 GAACCTCTC-GTGTACATCGCCCTACAACGCCGATTTTGACGGCGACGAGATGAACCTGC 3458507 Query 429703 ACGTGCCCCAGTC 429715 |||| || ||||| Sbjct 3458508 ACGTCCCGCAGTC 3458520 >seq5955 Length=126986 Score = 132 bits (146), Expect = 8e-25 Identities = 175/243 (72%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| |||||||||| |||||| || ||| ||| Sbjct 109012 TGTACTTGGTGACAGCCTTGGTTCCCTCACTGACGGCGTGCTTGGCCAACTCTCCGGGCA 108953 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || |||||| || || || |||||||| || || || || ||||||||| | Sbjct 108952 GGAGCAGGCGAACAGCCGTTTGGATCTCCCGACTGGTTATGGTCGAGCGCTTGTTGTAGT 108893 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||| || ||||| | | ||||| |||| || || || ||||| ||||| Sbjct 108892 GAGCCAGACGAGACGCCTCTGCAGCAATGCGCTCGAAGATATCATTCACAAAGCTGTTCA 108833 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| || || || || ||| ||||| |||||||| || ||||||| Sbjct 108832 TGATGCTCATCGCCTTCGACGAAATACCGGTGTCAGGGTGGACCTGCTTCAGGACCTTGT 108773 Query 1485710 AAA 1485712 ||| Sbjct 108772 AAA 108770 >seq5896 Length=454034 Score = 132 bits (146), Expect = 8e-25 Identities = 175/243 (72%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| |||||||||| |||||| || ||| ||| Sbjct 9092 TGTACTTGGTGACAGCCTTGGTTCCCTCACTGACGGCGTGCTTGGCCAACTCTCCGGGCA 9033 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || |||||| || || || |||||||| || || || || ||||||||| | Sbjct 9032 GGAGCAGGCGAACAGCCGTTTGGATCTCCCGACTGGTTATGGTCGAGCGCTTGTTGTAGT 8973 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||| || ||||| | | ||||| |||| || || || ||||| ||||| Sbjct 8972 GAGCCAGACGAGACGCCTCTGCAGCAATGCGCTCGAAGATATCATTCACAAAGCTGTTCA 8913 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| || || || || ||| ||||| |||||||| || ||||||| Sbjct 8912 TGATGCTCATCGCCTTCGACGAAATACCGGTGTCAGGGTGGACCTGCTTCAGGACCTTGT 8853 Query 1485710 AAA 1485712 ||| Sbjct 8852 AAA 8850 Score = 132 bits (146), Expect = 8e-25 Identities = 175/243 (72%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| |||||||||| |||||| || ||| ||| Sbjct 67047 TGTACTTGGTGACAGCCTTGGTTCCCTCACTGACGGCGTGCTTGGCCAACTCTCCGGGCA 66988 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || |||||| || || || |||||||| || || || || ||||||||| | Sbjct 66987 GGAGCAGGCGAACAGCCGTTTGGATCTCCCGACTGGTTATGGTCGAGCGCTTGTTGTAGT 66928 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||| || ||||| | | ||||| |||| || || || ||||| ||||| Sbjct 66927 GAGCCAGACGAGACGCCTCTGCAGCAATGCGCTCGAAGATATCATTCACAAAGCTGTTCA 66868 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| || || || || ||| ||||| |||||||| || ||||||| Sbjct 66867 TGATGCTCATCGCCTTCGACGAAATACCGGTGTCAGGGTGGACCTGCTTCAGGACCTTGT 66808 Query 1485710 AAA 1485712 ||| Sbjct 66807 AAA 66805 Score = 127 bits (140), Expect = 3e-23 Identities = 174/243 (72%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| |||||||||| |||||| || ||| ||| Sbjct 14015 TGTACTTGGTGACAGCCTTGGTTCCCTCACTGACGGCGTGCTTGGCCAACTCTCCGGGCA 13956 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || |||||| || || || |||||||| || || || || ||||||||| | Sbjct 13955 GGAGCAGGCGAACAGCCGTTTGGATCTCCCGACTGGTTATGGTCGAGCGCTTGTTGTAGT 13896 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||| || ||||| | | ||||| |||| || || || ||||| ||||| Sbjct 13895 GAGCCAGACGAGACGCCTCTGCAGCAATGCGCTCGAAGATATCATTCACAAAGCTGTTCA 13836 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| || || || || ||| || || |||||||| || ||||||| Sbjct 13835 TGATGCTCATCGCCTTCGACGAAATTCCGGTGTCAGGATGGACCTGCTTCAGGACCTTGT 13776 Query 1485710 AAA 1485712 ||| Sbjct 13775 AAA 13773 Score = 105 bits (116), Expect = 1e-16 Identities = 169/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| ||| || ||| |||||| || || ||| Sbjct 19165 TGTACTTGGTGACAGCCTTGGTTCCCTCACTGACAGCATGCTTGGCCAACTCTCCAGGCA 19106 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||| || || || |||||||| || || ||| || ||||||||| | Sbjct 19105 AAAGCAGGCGAACAGCCGTTTGGATCTCCCGACTGGTGATGGTCGAGCGCTTGTTGTAGT 19046 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || || || |||| | || || |||| || || || ||||| ||||| Sbjct 19045 GAGCTAGACGAGACGCTTCGGCAGCAATTCGCTCGAAAATATCATTTACAAAGCTGTTCA 18986 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 | || ||||| || || || || ||| || || ||||||||||| ||||||| Sbjct 18985 TTATGCTCATCGCCTTCGACGAAATTCCGGTGTCAGGATGGACCTGCTTGAGAACCTTGT 18926 Query 1485710 AAA 1485712 ||| Sbjct 18925 AAA 18923 >seq4563 Length=14502029 Score = 122 bits (134), Expect = 1e-21 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625 || |||||||| || |||||||| | ||||| | ||| | |||| ||||| | Sbjct 3561543 GAGAAGCGCACGGATGACATTTCATCCTGGGATGCCGACTTCCTCAAGGTGGACCAGGGC 3561602 Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685 ||||| || ||| |||||||||| || |||||||| ||||| || ||| || || | Sbjct 3561603 ACCCTGTTCGAGCTGATCCTCGCTGCGAACTACCTGAACATCCAGGGCCTGCTGGACGTC 3561662 Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745 |||||||| |||||||| | |||||||||||| |||| ||||||||||| | ||| Sbjct 3561663 ACTTGCAAGACGGTGGCCAATATGATCAAGGGCAAGACGCCGCAGGACATCCGCGACACC 3561722 Query 2035746 TTTAACATCA 2035755 || ||||| Sbjct 3561723 TTCGCCATCA 3561732 >seq1 Length=22559587 Score = 111 bits (122), Expect = 2e-18 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 2071819 GGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTC 2071878 ||||| | |||||||| || || | | | ||||| |||||| || ||| || Sbjct 20042788 GGGCACATTAGCGACCAATCTCCATTGGCCTCGACGCGCTTCATAAAGAGATCGGGTATC 20042847 Query 2071879 CACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGG 2071938 |||||| ||||||| |||||||| ||||| || |||||||||||| ||| || || || Sbjct 20042848 CACAGGGCGTAAAACAGATCGCGGGCCCGATTTTCCTCCTTGCCGGTGTTTTTCTTAAGT 20042907 Query 2071939 TCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTG 2071998 || || | || | || || | |||||| ||||||||||| ||||||||| || Sbjct 20042908 TCCAGGAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGA 20042967 Query 2071999 CGCTTGCCGCCGCC 2072012 |||||||| || || Sbjct 20042968 CGCTTGCCACCTCC 20042981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915323068810520