Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq6677 132 4e-25 seq8559 127 2e-23 seq137 100 2e-15 >seq6677 Length=374367 Score = 132 bits (146), Expect = 4e-25 Identities = 269/397 (68%), Gaps = 7/397 (2%) Strand=Plus/Minus Query 282083 TTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCT 282142 || || | |||||| ||||| || || | ||| || || | || | || | ||| Sbjct 1496 TTTGCCCTTTCACAAGCTGTTCTCAGACGTCGCAAAGCCCTGGCATTTCCCTTGATATCC 1437 Query 282143 GTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAAT 282200 | || | || ||||| || || ||| || | ||| | || || || |||||||||| Sbjct 1436 GACTTGTGCTTCCTCTTAAACTCCTCAGCAAA--ATGGTTGACCAGCCGGTTATCAAAAT 1379 Query 282201 CTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT---CCATCTT 282257 | ||||| ||||| | ||| | ||| | ||| | |||| | ||| || || || | Sbjct 1378 CCTCACCACCCAAGTGAGTGTCTCCAGCCGTGGACTTTACCTCGAAGAGGGAGCCCTCAT 1319 Query 282258 CAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 282317 ||| | || || | ||||| ||| || ||||||| || ||||| || ||||| Sbjct 1318 CAATGGTCAGAATGGAGACATCGAAGGTGCCGCCACCCAGGTCGAAAATCAGAACATTGC 1259 Query 282318 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 282377 || | |||| ||||| | ||||| || || ||||| ||||| ||||| |||| Sbjct 1258 GCTCCCCCTTGAGGTTCTTATCCAATCCATAGGCCAAGGCAGCCGCAGTGGGTTCGTTAA 1199 Query 282378 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 282437 | || |||| ||||| || || ||||| || ||||| || || || |||| || Sbjct 1198 TGATCCTCAGCACATTCAGCCCCGCAATGGAACCCGCATCCTTGGTTGCCTGTCGCTGGC 1139 Query 282438 AATCGTTAAAATATGCAGGAACAGTAATAACGGCATC 282474 |||||||||||| || || || ||||| ||||| || Sbjct 1138 TATCGTTAAAATAGGCTGGCACCGTAATCACGGCGTC 1102 >seq8559 Length=59032 Score = 127 bits (140), Expect = 2e-23 Identities = 268/397 (68%), Gaps = 7/397 (2%) Strand=Plus/Plus Query 282083 TTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCT 282142 || || | |||||| |||||||| | | ||| || || | || | || | ||| Sbjct 19721 TTTGCCCTTTCACAAGCTGTCCTCAAACGTCGCAAAGCCCTGGCATTTCCCTTGATATCC 19780 Query 282143 GTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAAT 282200 | || | || ||||| || || ||| || | ||| | || || || |||||||||| Sbjct 19781 GACTTGTGCTTCCTCTTAAACTCCTCAGCAAA--ATGGTTGACCAGCCGGTTATCAAAAT 19838 Query 282201 CTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG---TCCATCTT 282257 | ||||| ||||| | ||| | ||| | ||| | |||| | ||| || || || | Sbjct 19839 CCTCACCACCCAAGTGAGTGTCTCCAGCCGTGGACTTTACCTCGAAGAGGGAGCCCTCAT 19898 Query 282258 CAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 282317 ||| | || || | ||||| ||| || ||||||| || ||||| || ||||| Sbjct 19899 CAATGGTCAGAATGGAGACATCGAAGGTGCCGCCACCCAGGTCGAAAATCAGAACATTGC 19958 Query 282318 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 282377 || | |||| ||||| | || || || || ||||| ||||| |||||||| | Sbjct 19959 GCTCCCCCTTGAGGTTCTTATCTAATCCGTAGGCCAAGGCAGCCGCAGTGGGTTCATTGA 20018 Query 282378 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 282437 | || |||| ||||| || |||||||| || ||||| || || || || | || Sbjct 20019 TGATCCTCAGCACATTTAGCCCAGCAATGGAGCCCGCATCCTTGGTCGCCTGACGCTGGC 20078 Query 282438 AATCGTTAAAATATGCAGGAACAGTAATAACGGCATC 282474 |||||| ||||| || || || ||||| |||||||| Sbjct 20079 TATCGTTGAAATAGGCTGGCACCGTAATTACGGCATC 20115 >seq137 Length=289679 Score = 100 bits (110), Expect = 2e-15 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730 ||||| || || || ||||| || || || | ||| || || | || | || | ||| Sbjct 77070 CCAATCAAACGCTTGGCATCGAAGATCGTCTGGGTCGGGTTCATGGCCACCTGGTTCTTG 77129 Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790 || ||||| || |||||| | || || || || || | |||||| |||||||| || ||| Sbjct 77130 GCGGCATCGCCGATCAGACGCTCCGTATCGGTGAAGGCAACATAGGATGGAGTGGTACGA 77189 Query 282791 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 282850 ||||| || || || || || || || || || |||| || | || || || || Sbjct 77190 TTACCCTGGTCGTTGGCGATGATCTCGACCTTGCCATGCTGGAACACTCCCACGCACGAG 77249 Query 282851 AAAGTTGTTCCTAAATCAATACCAATAGCA 282880 | || || || ||||||||||||| |||| Sbjct 77250 TAGGTCGTGCCCAAATCAATACCAACAGCA 77279 Score = 100 bits (110), Expect = 2e-15 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730 ||||| || || || ||||| || || || | ||| || || | || | || | ||| Sbjct 85113 CCAATCAAACGCTTGGCATCGAAGATCGTCTGGGTCGGGTTCATGGCCACCTGGTTCTTG 85172 Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790 || ||||| || |||||| | || || || || || | |||||| |||||||| || ||| Sbjct 85173 GCGGCATCGCCGATCAGACGCTCCGTATCGGTGAAGGCAACATAGGATGGAGTGGTACGA 85232 Query 282791 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 282850 ||||| || || || || || || || || || |||| || | || || || || Sbjct 85233 TTACCCTGGTCGTTGGCGATGATCTCGACCTTGCCATGCTGGAACACTCCCACGCACGAG 85292 Query 282851 AAAGTTGTTCCTAAATCAATACCAATAGCA 282880 | || || || ||||||||||||| |||| Sbjct 85293 TAGGTCGTGCCCAAATCAATACCAACAGCA 85322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740204248681680