Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq3325 95.1 1e-14 seq1 93.3 4e-14 >seq3325 Length=21082 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| | ||| ||||| | || ||||| || || |||||||||||| | Sbjct 20753 CCACCACGCAGACGGAGAACCAAATGCAAAGTCGATTCCTTCTGGATGTTGTAATCGGAC 20694 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| ||| || |||||||| || || |||||| || |||||||| || || Sbjct 20693 AGGGTGCGTCCGTCCTCCAGTTGTTTGCCGGCGAAGATCAATCGCTGCTGATCTGGGGGG 20634 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 ||||| || ||||| || || || | | ||| | ||||||| || || ||| Sbjct 20633 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCTGATGGCTCAACT 20574 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | |||||||| || | ||| || || || || ||||| Sbjct 20573 TCCAAGGTGATGGTCTTGCCAGTAAGTGTCTTGACAAAGATCTGCAT 20527 >seq1 Length=22559587 Score = 93.3 bits (102), Expect = 4e-14 Identities = 120/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 ||||| || || || ||||| |||||||||| |||||||| ||||| || ||||||||| Sbjct 20155475 TCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTG 20155416 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || ||| || ||| | | ||| | || || | ||||| || |||| ||| | Sbjct 20155415 TCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACCTCAAGAGTGATG 20155356 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCTTATGTT 137421 |||||||| || | || || ||||| || ||||| ||| |||| Sbjct 20155355 GTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT--CTTGTGTT 20155313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488490992976000