Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq4563 86.0 1e-11 >seq4563 Length=14502029 Score = 86.0 bits (94), Expect = 1e-11 Identities = 185/274 (68%), Gaps = 2/274 (1%) Strand=Plus/Minus Query 183037 CAAATACAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAA 183096 ||| | ||| || || | || || ||||||||| | ||| | || ||||||||||| || Sbjct 8077010 CAACTGCAGCTGGTGCGCGAGGGCAAAATGCATGGCTTTCTGCGCATGTACTGGGCCAAG 8076951 Query 183097 AAGATACTTGAATGGACAAGAACTCCGGAAGATGCTTTGAGTTATAGTATCTATATGAAC 183156 ||||| || || ||||| || || || || || || ||| || |||| Sbjct 8076950 AAGATTCTCGAGTGGACCGCCACCCCTGAGGAGGCACTGGAATATGCGATTCTCCTGAAT 8076891 Query 183157 AATAAGTACGAACTAGACGGTACG-GATCCTAACGGATACGTAGGTTGTATGTGGTCTAT 183215 | |||||| || || || ||| ||||| || ||||| || || || |||||||| || Sbjct 8076890 GACAAGTACAGCCTCGATGG-ACGCGATCCCAATGGATATGTCGGCTGCATGTGGTCCAT 8076832 Query 183216 TTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATAT 183275 | | ||| | ||||| | | ||||| || | | || || || ||| | |||| || Sbjct 8076831 TGGGGGAATCCACGACATGGGCTGGAAGGAGCGGGCCATTTTCGGCAAGGTTCGATACAT 8076772 Query 183276 GAATTATGAGAGTTCTAAGAAGAAATTTGATGTT 183309 ||| ||| || | | ||| || || |||||| Sbjct 8076771 GAACTATCAGGGGTGCAAGCGCAAGTTCGATGTT 8076738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903313179884800