Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq3325 118 7e-22
seq4812 98.7 7e-16
seq1 96.9 2e-15
seq2 95.1 8e-15
>seq3325
Length=21082
Score = 118 bits (130), Expect = 7e-22
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || ||| | |||||||| | ||| || || || ||||||||||||||
Sbjct 20754 ACCACCACGCAGACGGAGAACCAAATGCAAAGTCGATTCCTTCTGGATGTTGTAATCGGA 20695
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| |||||| |||| |||| |||||| ||||| || ||||| |||||||||||| | ||
Sbjct 20694 CAGGGTGCGTCCGTCCTCCAGTTGTTTGCCGGCGAAGATCAATCGCTGCTGATCTGGGGG 20635
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || ||||| || || ||| |||| || | |||||| || || |
Sbjct 20634 GATGCCCTCCTTGTCCTGGATCTTGGCCTTC-ACATTTTCAATGGTGTCTGATGGCTCAA 20576
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| || || || || | || || ||||||||||||||
Sbjct 20575 CTTCCAAGGTGATGGTCTTGCCAGTAAGTGTCTTGACAAAGATCTGCAT 20527
Score = 105 bits (116), Expect = 4e-18
Identities = 165/236 (70%), Gaps = 9/236 (4%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | | ||| | |||||| || || ||| ||| || || ||||||||||| ||
Sbjct 21067 CCACCGCGTAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAC 21008
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
| ||||| | || |||| || |||||||| ||||| | ||||||||||||| | ||
Sbjct 21007 AAAGTGCGACCATCCTCCAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGGGG 20948
Query 33643 ACACCTTCTTTGTCGGCAATTTT--------CTGTTTCAACATAGTCACGGTGTCGCTTG 33694
| || || ||||| ||||| | |||||| | ||| || | | ||||
Sbjct 20947 ATTCCCTCCTTGTCCTGGATTTTCGCCTTTACGTTTTCAATAGTGTC-CGAAGGCTCTTG 20889
Query 33695 ATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
||||| |||| ||||| || || || || || || ||||| || |||||||||
Sbjct 20888 GCTCCACCTCAAGAGTGATTGTCTTTCCGGTCAAAGTCTTTACGAAAATCTGCATA 20833
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | || ||| | ||||| || || || ||| || || |||||||| |||||
Sbjct 19613 CCACCGCGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 19554
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| |||||| |||| |||| |||||| ||||| || || | ||||||||||||| | ||
Sbjct 19553 AGGGTGCGTCCGTCCTCCAGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGG 19494
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || || || ||||| ||| |||| || | || ||| | |||||
Sbjct 19493 ATGCCCTCCTTATCCTGGATTTTGGCCTTC-ACATTCTCAATCGTATCGGAGGGCTCCAC 19435
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | || || || || || || || || || ||||||||||||||
Sbjct 19434 CTCCAAAGTAATGGTCTTTCCAGTCAAGGTCTTCACAAAGATCTGCAT 19387
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | | ||| | |||||| || || ||| ||| || || ||||||||||| ||
Sbjct 19841 CCACCGCGTAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAC 19782
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
| ||||| | || |||| || |||||||| ||||| | ||||||||||||| | ||
Sbjct 19781 AAAGTGCGACCATCCTCCAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGGGG 19722
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| || || ||| |||| || | ||| || | || ||
Sbjct 19721 ATTCCCTCCTTGTCCTGGATCTTGGCCTTC-ACATTCTCGATGGTATCAGAAGGCTCAAC 19663
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|||| ||||| ||||| || || || || || ||||||||||||||
Sbjct 19662 TTCAAGAGTGATGGTTTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 19615
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | | ||| | |||||| || || ||| ||| || || ||||||||||| ||
Sbjct 20069 CCACCGCGTAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAC 20010
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
| ||||| | || |||| || |||||||| ||||| | ||||||||||||| | ||
Sbjct 20009 AAAGTGCGACCATCCTCCAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGGGG 19950
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| || || ||| |||| || | ||| || | || ||
Sbjct 19949 ATTCCCTCCTTGTCCTGGATCTTGGCCTTC-ACATTCTCGATGGTATCAGAAGGCTCAAC 19891
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|||| ||||| ||||| || || || || || ||||||||||||||
Sbjct 19890 TTCAAGAGTGATGGTTTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 19843
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || ||| | ||||| || | || ||| || || ||||||||||||||
Sbjct 20298 ACCACCACGCAGACGGAGAACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAATCGGA 20239
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| | || || | || |||||||| || || | ||||||||||||| | ||
Sbjct 20238 CAGGGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGGGG 20179
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || ||||| || || | | || | || | |||||| | |||||
Sbjct 20178 GATGCCCTCCTTGTCTTGGATCTT-AGCCTTGACGTTTTCAATGGTGTCCGAAGGTTCCA 20120
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| || || || || | ||||| ||||||||||||||
Sbjct 20119 CCTCCAGGGTGATGGTCTTGCCAGTAAGAGTTTTGACAAAGATCTGCAT 20071
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | | ||| | ||||| || || || ||| || || |||||||| |||||
Sbjct 20525 CCACCGCGGAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 20466
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| |||||| |||| |||| |||||| ||||| || || | ||||||||||||| | ||
Sbjct 20465 AGGGTGCGTCCGTCCTCCAGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGG 20406
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| ||||| | | || | || | ||||| | || ||
Sbjct 20405 ATGCCCTCCTTGTCCTGGATTTT-AGCCTTTACGTTTTCAATAGTGTCCGAAGGCTCTAC 20347
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|||| ||||| || || || || || || || || || |||||||||
Sbjct 20346 TTCAAGAGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCATA 20298
>seq4812
Length=908733
Score = 98.7 bits (108), Expect = 7e-16
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | || ||| | ||||| || || || ||| || || |||||||| |||||
Sbjct 620287 CCACCGCGCAGACGGAGTACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 620346
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| |||||| |||| |||| |||||| ||||| || || | ||||||||||||| | ||
Sbjct 620347 AGGGTGCGTCCGTCCTCCAGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGA 620406
Query 33643 ACACCTTCTTTGTC 33656
| ||| || |||||
Sbjct 620407 ATACCCTCCTTGTC 620420
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || ||| | |||||||| | || ||| || || ||||||||||||||
Sbjct 620058 ACCACCACGCAGACGGAGAACCAAATGCAAGGTCGACTCCTTCTGAATGTTGTAATCGGA 620117
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| ||||| | || || | || |||||||| || || | ||||||||||||| | ||
Sbjct 620118 CAAAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGGGG 620177
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| || ||||| || || | || || | || | |||||| | ||||
Sbjct 620178 AATACCCTCCTTGTCTTGGATCTT-GGCTTTGACGTTTTCAATGGTGTCTGAAGGCTCCA 620236
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| || || || || | ||||| || |||||||||||
Sbjct 620237 CCTCCAGGGTGATGGTCTTGCCAGTAAGAGTTTTGACGAAGATCTGCAT 620285
>seq1
Length=22559587
Score = 96.9 bits (106), Expect = 2e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||| | || || | |||||| || | |||| ||| || || ||||| || || |
Sbjct 20155549 CACCACCACGCAGGCGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAG 20155490
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
|||| ||||| | || |||| || || || || || |||| ||||||||||||| | |
Sbjct 20155489 AGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAG 20155430
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | ||||||||||| ||| || | || |||| || | || || | |||
Sbjct 20155429 GAATTCCTTCTTTGTCCTGAATCTT-GGCTTTGACATTTTCGATAGTATCCGAAGGTTCG 20155371
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| |||| ||||| || || || || | || || || |||||||||||
Sbjct 20155370 ACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 20155321
Score = 87.8 bits (96), Expect = 1e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || || | ||||| || || || ||| || || |||||||| |||||
Sbjct 1136944 ACCACCGCGCAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 1137003
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || || |||| |||| || || ||||| || |||| ||||||||||||| | ||
Sbjct 1137004 CAGGGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGG 1137063
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || ||||| || || ||| |||| || | |||||| | ||||
Sbjct 1137064 GATTCCCTCCTTGTCCTGGATCTTGGCCTTC-ACATTCTCGATGGTGTCCGAAGGCTCCA 1137122
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752
| || | ||||| || || || || | ||||| || ||||| ||||| ||
Sbjct 1137123 CCTCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCATGGT 1137174
>seq2
Length=2985096
Score = 95.1 bits (104), Expect = 8e-15
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | || ||| | |||||||| | ||| ||| || || || ||||| |||||
Sbjct 124193 CCACCACGCAGACGCAGGACCAAATGCAAAGTAGACTCCTTCTGGATATTGTAGTCGGAC 124134
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
| |||||| |||| ||||| || |||||||| || |||||||||||||| ||| | ||
Sbjct 124133 AAAGTGCGTCCGTCCTCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGA 124074
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| || || ||| || | || | ||| ||| | || ||
Sbjct 124073 ATGCCCTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCGATGGTATCGGAAGGCTCAAC 124015
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | ||||| || || || || | || || || ||||||||||||
Sbjct 124014 CTCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATA 123966
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328669227225600
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