Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1 235 5e-57
seq5016 131 2e-25
seq4812 104 2e-17
seq3325 98.7 9e-16
seq4563 86.0 6e-12
seq2 86.0 6e-12
>seq1
Length=22559587
Score = 235 bits (260), Expect = 5e-57
Identities = 955/1483 (64%), Gaps = 40/1483 (3%)
Strand=Plus/Plus
Query 146551 ACAGTGAATTGTTGTGTGTGCGCCGCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTG 146610
|||||||| || | || || || || |||||||||| |||||||| || |||||
Sbjct 20041591 ACAGTGAACTGAATAGCGTTTGCAGCTGGCTTTGTGCGCAGGTAATACATTCCAGTTTTT 20041650
Query 146611 AGGCCACATCGCCACGAGTGATTGTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCC 146670
|| ||| | ||| || | | ||| || ||||| | | |||| | ||||| |||
Sbjct 20041651 AGACCAGCTTTCCAGGAATAAAAGTGTATGGAAGTAAGTTTTCCGTAGTTTGGCTCTGCC 20041710
Query 146671 ACGAAAAGATTAAACGATTGGCTTTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCA 146730
|| || || ||||| || || |||||||| || || || || || ||||||| |
Sbjct 20041711 ACATGAATGTTGAACGACTGACTCTGATCTATAAACGCACCTCGATCTGCGGCCATCTTA 20041770
Query 146731 ATCATGCGTTTTGTCTTCATTTCCCAAGCGGTTTTGTACAGCCCCTTAACGCTATCTGGA 146790
|| || ||| |||||||| | ||||||||||| | ||| | | ||
Sbjct 20041771 ATAGTGGACTTTACTGAGATTTCCCACACAGTTTTGTACAGATCGCGAACCTTCTGGGGG 20041830
Query 146791 ATACCTTCAATGTTTTGAATAGAGCCCTTGTGCGCAAAAATAGTGTTTCGT-ATTTCGGG 146849
|| | ||||| ||||| || |||||| || | || || || ||| | || |||
Sbjct 20041831 ATGGCCTCAATATTTTGGATTGAGCCCCTGCTGGAAATGATT-TGGTTCTTCATATCGT- 20041888
Query 146850 CGTGTAA-AGGTTTAGTTTAATGAGGTCATCAATTAAATACTGATTGACCACTTGAAACT 146908
||| | | || || | | ||||| | |||| || || |||||||| || |
Sbjct 20041889 CGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTAACCACTTGGAATT 20041948
Query 146909 CGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTAT 146968
| || | ||| || || ||| ||| | ||| | ||| ||||||| || || || || |
Sbjct 20041949 CTCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTAAGGCTCGAATGATTCGTTGT 20042008
Query 146969 TGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCA 147028
| || | ||||| || || | || || ||||| || ||||||| || || || |
Sbjct 20042009 TACCCATAATTTGAGCAGTAGAAGCAGTGGGCATAGGAGCAACCAACAGGGAGTTCCGGA 20042068
Query 147029 GACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCACATCGACGAGGGCGTCA 147088
||||| | |||| ||||||| | ||||||||||| | || |||
Sbjct 20042069 CACCGTGCTTCTTGATGGACTCCTTCAGTTTCTGCCAGTCCCAAAGGTTCGTTGGCTCTT 20042128
Query 147089 CGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGT 147148
|| ||||||||||||||| || | |||| || |||| || || | | || |
Sbjct 20042129 TGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAGGTTTCAT 20042188
Query 147149 AGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTT 147208
| || ||| ||| |||| |||||| || || || | || || ||||| || ||||
Sbjct 20042189 ATGGACCTTCGATCTGGGCCAGTTCACAACTGGCTTCCAAAGCGCCGTAGTAGATAGTTT 20042248
Query 147209 CGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCA 147268
|| || || | || | || | ||||| || || || || || | |||| || |
Sbjct 20042249 CGAAAATCTGCTGATTCAAGAGGCCGGCTTCATCACTTTCATAGGGGAACCGCATGAGAA 20042308
Query 147269 CAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGC 147328
||||| || || || ||||||| ||||| ||| | || |||||| | |||
Sbjct 20042309 TCAAGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGATGCCTCAAATTGGATT 20042368
Query 147329 GCTTCGCGCTC-GCTATGGGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACT 147387
||| || ||| | | ||| ||| ||| ||| || |||||||| || ||
Sbjct 20042369 TCTTGGC-CTCTGGCAGGGGGTAGAAGTTAATATCGATTATCTTGTTAAGATTCTTGGTA 20042427
Query 147388 ACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTCCCGTCTTCGACACGTACG 147447
|| || || | | || ||||||| |||||| || ||| | ||| | ||
Sbjct 20042428 ACCGTCTTGGTAACTTCCTTAAGTTTCTTGAAATCGTATGTC---TTCTCGGGAGTGACA 20042484
Query 147448 CATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTAC 147507
| ||| | |||||| || |||| ||||| || || |||| || | || |||
Sbjct 20042485 AACATGTTGAGGGCGATGGATGCCAAGTTGCAAACTGCAATCTCATCCGGAGCGGAATAC 20042544
Query 147508 TGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTT 147567
| |||||||| | ||||| ||||| || || ||| || | ||| ||||| |||||
Sbjct 20042545 TCTACGATTTCTGTGCACAAATTGCTACACTTGATGGTGCCGACATTCTGCTGGTTGCTC 20042604
Query 147568 TTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCA 147627
|||| ||||| || || || || | |||||| || || || ||||| || | ||||
Sbjct 20042605 TTCCTGTTGCAGGCATCCTTAAACAACATGTAGGGGTTTCCAGTTTCGACCTGTGCTTCA 20042664
Query 147628 ACGAT---AAACCTATGCAGGTCCTGCGCTCGCACCCG--CTGCCGATAGCGGCCCTCGT 147682
| || ||||| |||| || || | | | | ||| | | || ||||| |
Sbjct 20042665 ATAATGGCAAACC---ACAGGGATTGAGC-CTTAACAGTTCTGTTGGCA-CGACCCTCTT 20042719
Query 147683 TTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGAC 147742
|| || ||| |||||| || || || ||||| | |||| ||| || || |
Sbjct 20042720 GCTCATATTTCTCATACAACTTTTCGAATTCATCGCCCCACACATCGTGAAGCCCAGGGC 20042779
Query 147743 ACTGATGCGGACACATCAGCGACCACATGT-CGTCCGCGTTAACGCGTCGCATAAACAGA 147801
| | ||| || ||||| |||||||| || | | | || | ||||| |||||| |||
Sbjct 20042780 ATTTATGTGGGCACATTAGCGACCA-ATCTCCATTGGCCTCGACGCGCTTCATAAAGAGA 20042838
Query 147802 TCCGGCACCCACAGCGCGTACATAAGATCGCG----CGCTTTGCAATCCTCGGCGCCCAT 147857
|| || | |||||| ||||| | |||||||| || ||| ||||| ||| |
Sbjct 20042839 TCGGGTATCCACAGGGCGTAAAACAGATCGCGGGCCCGATTT----TCCTCCTTGCCGGT 20042894
Query 147858 GTTGCGTTTC--AAATT--AAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGA 147913
||| |||| || || | | || | | ||| || | ||||||||| || | ||| |
Sbjct 20042895 GTT---TTTCTTAAGTTCCAGGAACTC-AAAGACATCCGAGTGCCAGGGCTCCAGGTAAA 20042950
Query 147914 CGGCCAGCGCACCTTTACGCTT---TCCGCCCTGGTCGACATGGCGCACCATGTTGTTAA 147970
||| | ||||| |||||| || || || || |||| ||| ||| ||||| |
Sbjct 20042951 TGGCAAAGGCACCGGGACGCTTGCCACCTCCTTGATCCACATAACGCGCCACATTGTTGA 20043010
Query 147971 ACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGT 148013
| || | || |||||| ||| ||| | | ||||| || ||
Sbjct 20043011 AGACCCTCAACATGGGAACCAAGCCATTGGATGTGCCATTCGT 20043053
Score = 98.7 bits (108), Expect = 9e-16
Identities = 155/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| ||||| ||||| || | | ||||| || |||||||| ||||| | |||
Sbjct 20155542 ACGCAGGCGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGT 20155483
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| |||||| ||||| || || | |||| |||||||| ||||||||||| || ||
Sbjct 20155482 GCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCC 20155423
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|||||| || ||| || ||| | | ||| | |||||| | || || || || |
Sbjct 20155422 TTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACCTCAAG 20155363
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | || || || || || || || | ||| ||||||||
Sbjct 20155362 AGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 20155321
>seq5016
Length=829163
Score = 131 bits (144), Expect = 2e-25
Identities = 233/338 (69%), Gaps = 3/338 (1%)
Strand=Plus/Minus
Query 51541 CAATACCGATGATGCCGCAGCCGAGACGTCCGCCCGAGTTGCCCGTGGTCTTGCTCAGCG 51600
|||| || |||| ||||||||| | || | || | ||| ||||||| ||||||||||
Sbjct 682143 CAATGCCAATGACGCCGCAGCCAATGCGGGCACCAGCGTTTCCCGTGGACTTGCTCAGCT 682084
Query 51601 GATGGTCGGTGAGGCCGAGATCGTCGCGCTTTGCGTGAACCACCAGACTGCGGCCAACGA 51660
||| | |||||||||| ||| | ||||| ||||| | |||| || | ||
Sbjct 682083 CGTGGCCACCCTGGCCGAGATCATCGGCATCGGCGTGGACCACAACGGTGCGCCCTATGA 682024
Query 51661 CGCTATTTTCGCCGAAAAGCGTCATCACGTTGTCGATCTTGTCCACTTCGGTGAGGGCGT 51720
||| | ||||||| | ||| ||| |||| | ||| || | ||| || |
Sbjct 682023 TGCTGTCGGCGCCGAACAACGTGATCTTCGAGTCGGTAATGTTGACCTTCGTG-GGACAG 681965
Query 51721 TGGACACTTTAGCCTCGACATTGCCCAAGTCGCCGACGTGGCGCATCGCCGCGTTCGGAG 51780
| | | || ||||| | ||||||| || || | ||| || || | || ||||
Sbjct 681964 TCGCCGCTC--GCCTCAATGTTGCCCAGATCTCCCAGGTGACGATTCTCGTCGGCGGGAG 681907
Query 51781 CGCCGTGGTCGCTGCCGGTGGGGTTGAAGTGTTCGCCCGCCGACGTGCAGCCGTTGCTGG 51840
| ||||| || |||| |||||||||||| || | |||| ||||||||||| ||
Sbjct 681906 CTCCGTGCTCCTTGCCATAGGGGTTGAAGTGCGGTCCGGACGACATGCAGCCGTTGGTGT 681847
Query 51841 TGTCGCCGAATTCGTGCACGTGGAATCCGTGCAGGCCC 51878
|||| || || ||||| |||||||||||||| ||||||
Sbjct 681846 TGTCCCCAAACTCGTGAACGTGGAATCCGTGAAGGCCC 681809
>seq4812
Length=908733
Score = 104 bits (114), Expect = 2e-17
Identities = 156/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| || | ||||||||| | | | ||||| || ||||||||||| ||| || ||
Sbjct 620064 ACGCAGACGGAGAACCAAATGCAAGGTCGACTCCTTCTGAATGTTGTAATCGGACAAAGT 620123
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| ||| || ||||| || |||| |||| |||||||| |||||||| || || ||
Sbjct 620124 GCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGGGGAATACC 620183
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|| || || || || ||| | | ||| | || || | |||||||| || |
Sbjct 620184 CTCCTTGTCTTGGATCTTGGCTTTGACGTTTTCAATGGTGTCTGAAGGCTCCACCTCCAG 620243
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | || || ||||| |||||||| | ||| ||||||||
Sbjct 620244 GGTGATGGTCTTGCCAGTAAGAGTTTTGACGAAGATCTGCAT 620285
>seq3325
Length=21082
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
||||| || | | | ||||| || || |||||||||||| || ||| || || ||
Sbjct 19595 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCC 19536
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
|| ||||| |||| |||| |||||||| |||||||| || ||||| || |||||
Sbjct 19535 AGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGGATGCCCTCCTTATCCTGG 19476
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
||||| |||| | || | ||||||| |||||||| || | || | || ||
Sbjct 19475 ATTTTGGCCTTCACATTCTCAATCGTATCGGAGGGCTCCACCTCCAAAGTAATGGTCTTT 19416
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||||| || || | || ||||||||
Sbjct 19415 CCAGTCAAGGTCTTCACAAAGATCTGCAT 19387
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
||||| || | | | ||||| || || |||||||||||| || ||| || || ||
Sbjct 20507 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCC 20448
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
|| ||||| |||| |||| |||||||| |||||||| || ||||| || || ||
Sbjct 20447 AGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGG 20388
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
||||| || | | ||| | ||| || | ||||| ||||| | || | || ||
Sbjct 20387 ATTTTAGCCTTTACGTTTTCAATAGTGTCCGAAGGCTCTACTTCAAGAGTGATGGTCTTT 20328
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| |||| ||| || | ||||||||||||
Sbjct 20327 CCGGTCAAAGTCTTGACGAAAATCTGCAT 20299
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/222 (69%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| || | |||||| || | | | ||||| || ||||||||||| ||| || |||
Sbjct 20292 ACGCAGACGGAGAACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAATCGGACAGGGT 20233
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| ||| || ||||| || |||| |||| |||||||| |||||||| || |||||
Sbjct 20232 GCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGGGGGATGCC 20173
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|| || || || || || | | ||| | || || | || ||||| || |
Sbjct 20172 CTCCTTGTCTTGGATCTTAGCCTTGACGTTTTCAATGGTGTCCGAAGGTTCCACCTCCAG 20113
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | || || ||||| |||||||| | || ||||||||
Sbjct 20112 GGTGATGGTCTTGCCAGTAAGAGTTTTGACAAAGATCTGCAT 20071
>seq4563
Length=14502029
Score = 86.0 bits (94), Expect = 6e-12
Identities = 98/128 (77%), Gaps = 9/128 (7%)
Strand=Plus/Plus
Query 46461 TGGAAGGTGGAGGAGGTGGATCTGTCTAGGGACTATGAC-GACTTTGA--GTCTAAATTA 46517
|||| |||||||||||||||||||| | |||| |||| |||| | | || ||
Sbjct 3739078 TGGACCGTGGAGGAGGTGGATCTGTCCAAGGACC-TGACCGACTGGCACCGCCTGAAG-- 3739134
Query 46518 AACGATGACGAACGTTACTTTATCAAGCACGTGTTGGCGTTCTTTGCCGCCGCCGATAGC 46577
|| ||||||||| |||| ||| ||||||| |||| ||||||||||| ||||| ||
Sbjct 3739135 ---GACGACGAACGTCACTTCATCTCGCACGTGCTGGCCTTCTTTGCCGCATCCGATGGC 3739191
Query 46578 ATCGTGAA 46585
||||||||
Sbjct 3739192 ATCGTGAA 3739199
>seq2
Length=2985096
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
||||| || | | | ||||| || || |||||||||||| || || || ||| ||
Sbjct 123947 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGTCCATCCTCC 123888
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
| ||| || |||| |||| |||||||| || ||||| || ||||| || || ||
Sbjct 123887 AACTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 123828
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
|| || || | | || | ||||||| ||||| || || | || | || ||
Sbjct 123827 ATCTTGGCCTTAACATTCTCGATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTCTTG 123768
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|||||||| ||||| | |||||| ||||||
Sbjct 123767 CCAGTCAGGGTTTTCACGAAAATTTGCATG 123738
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476559487684800
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