Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1 102 7e-17 >seq1 Length=22559587 Score = 102 bits (112), Expect = 7e-17 Identities = 435/675 (64%), Gaps = 27/675 (4%) Strand=Plus/Plus Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698 || ||||| || || | || || || || || || | ||| || ||||| || || ||| Sbjct 20041591 ACAGTGAACTGAATAGCGTTTGCAGCTGGCTTTGTGCGCAGGTAATACATTCCAGTTTTT 20041650 Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTA--TAGCTCGGATCGG 136756 | ||| | |||||||||| ||||| || | || |||| ||| | || || | Sbjct 20041651 AGACCAGCTTTCCAGGAATAAAAGTGTATGGAAGT--AAGTTTTCCGTAGTTTGGCTCTG 20041708 Query 136757 CCACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGT 136816 |||| || || | ||| || |||||||| || | | || || ||||||||||| | Sbjct 20041709 CCACATGAATGTTGAACGACTGACTCTGATCTATAAACGCACCTCGATCTGCGGCCATCT 20041768 Query 136817 TCAATAGTACTTTTTGCTTA-ATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGC 136875 | |||||| ||| || | |||||||| | ||||| | || || || || | Sbjct 20041769 T-AATAGTGGACTTTACTGAGATTTCCCACACAGTTTTGTACAGATCGCGAACCTTCTGG 20041827 Query 136876 GGAATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGATGATTTTCATCATGAGATCA 136935 || || | || ||||| || | || || || | ||||||| || | | ||| Sbjct 20041828 GGGATGGCCTCAATATTTTGGATTGAGCCCCTGCTGGAAATGATTTGGTTCTTCATATC- 20041886 Query 136936 GTCGAGT-ATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACTTGATA 136994 |||| | | || ||| | || | | | ||| || || || ||||| | Sbjct 20041887 GTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTAACCACTTGGAA 20041946 Query 136995 TTCGCCCGATAGCACTCTGC--GTACGTACAGATTACTAGTGAACGGCTCGAACGATTCG 137052 ||| || || || |||| | ||| || | ||| | ||| | |||||||| |||||| Sbjct 20041947 TTCTCCAGACAGAACTCGCCTGGTA--TAAATATTCGTTGTGTAAGGCTCGAATGATTCG 20042004 Query 137053 TTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAATTC 137112 |||||||||| ||| || ||||| | || || ||||| ||| | ||||| || ||| Sbjct 20042005 TTGTTACCCATAATTTGAGCAGTAGAAGCAGTGGGCATAGGAGCAACCAACAGGGAGTTC 20042064 Query 137113 CGTAAACCGTGTACGGCCAATTGTTG-----CTTGAGCTCTTTCCAGTTCCACAGATTGT 137167 || | ||||| || ||| || ||| || | | ||||| ||| || || Sbjct 20042065 CGGACACCGT-----GCTTCTTGATGGACTCCTTCAGTTTCTGCCAGTCCCAAAG---GT 20042116 Query 137168 TCGATTGGGT-TATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCT 137226 ||| |||| | | | | ||||| || |||||| || ||| || | || ||| | Sbjct 20042117 TCG-TTGGCTCTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCC 20042175 Query 137227 GCATAAGAATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAGTGCGCCA 137286 |||| | ||||||| || | | | ||||||||| ||| | | ||||| Sbjct 20042176 TCATAGGTTTCATATGGACCTTCGATCTGGGCCAGTTCACAACTGGCTTCCAAAGCGCCG 20042235 Query 137287 TAGTAAATAGTTTCG 137301 ||||| ||||||||| Sbjct 20042236 TAGTAGATAGTTTCG 20042250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445046107257600