Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 7e-17
>seq1
Length=22559587
Score = 102 bits (112), Expect = 7e-17
Identities = 435/675 (64%), Gaps = 27/675 (4%)
Strand=Plus/Plus
Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698
|| ||||| || || | || || || || || || | ||| || ||||| || || |||
Sbjct 20041591 ACAGTGAACTGAATAGCGTTTGCAGCTGGCTTTGTGCGCAGGTAATACATTCCAGTTTTT 20041650
Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTA--TAGCTCGGATCGG 136756
| ||| | |||||||||| ||||| || | || |||| ||| | || || |
Sbjct 20041651 AGACCAGCTTTCCAGGAATAAAAGTGTATGGAAGT--AAGTTTTCCGTAGTTTGGCTCTG 20041708
Query 136757 CCACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGT 136816
|||| || || | ||| || |||||||| || | | || || ||||||||||| |
Sbjct 20041709 CCACATGAATGTTGAACGACTGACTCTGATCTATAAACGCACCTCGATCTGCGGCCATCT 20041768
Query 136817 TCAATAGTACTTTTTGCTTA-ATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGC 136875
| |||||| ||| || | |||||||| | ||||| | || || || || |
Sbjct 20041769 T-AATAGTGGACTTTACTGAGATTTCCCACACAGTTTTGTACAGATCGCGAACCTTCTGG 20041827
Query 136876 GGAATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGATGATTTTCATCATGAGATCA 136935
|| || | || ||||| || | || || || | ||||||| || | | |||
Sbjct 20041828 GGGATGGCCTCAATATTTTGGATTGAGCCCCTGCTGGAAATGATTTGGTTCTTCATATC- 20041886
Query 136936 GTCGAGT-ATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACTTGATA 136994
|||| | | || ||| | || | | | ||| || || || ||||| |
Sbjct 20041887 GTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTAACCACTTGGAA 20041946
Query 136995 TTCGCCCGATAGCACTCTGC--GTACGTACAGATTACTAGTGAACGGCTCGAACGATTCG 137052
||| || || || |||| | ||| || | ||| | ||| | |||||||| ||||||
Sbjct 20041947 TTCTCCAGACAGAACTCGCCTGGTA--TAAATATTCGTTGTGTAAGGCTCGAATGATTCG 20042004
Query 137053 TTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAATTC 137112
|||||||||| ||| || ||||| | || || ||||| ||| | ||||| || |||
Sbjct 20042005 TTGTTACCCATAATTTGAGCAGTAGAAGCAGTGGGCATAGGAGCAACCAACAGGGAGTTC 20042064
Query 137113 CGTAAACCGTGTACGGCCAATTGTTG-----CTTGAGCTCTTTCCAGTTCCACAGATTGT 137167
|| | ||||| || ||| || ||| || | | ||||| ||| || ||
Sbjct 20042065 CGGACACCGT-----GCTTCTTGATGGACTCCTTCAGTTTCTGCCAGTCCCAAAG---GT 20042116
Query 137168 TCGATTGGGT-TATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCT 137226
||| |||| | | | | ||||| || |||||| || ||| || | || ||| |
Sbjct 20042117 TCG-TTGGCTCTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCC 20042175
Query 137227 GCATAAGAATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAGTGCGCCA 137286
|||| | ||||||| || | | | ||||||||| ||| | | |||||
Sbjct 20042176 TCATAGGTTTCATATGGACCTTCGATCTGGGCCAGTTCACAACTGGCTTCCAAAGCGCCG 20042235
Query 137287 TAGTAAATAGTTTCG 137301
||||| |||||||||
Sbjct 20042236 TAGTAGATAGTTTCG 20042250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445046107257600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |