Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1 309 4e-79 >seq1 Length=22559587 Score = 309 bits (342), Expect = 4e-79 Identities = 501/717 (70%), Gaps = 18/717 (3%) Strand=Plus/Minus Query 146799 GGGGTGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATCGTCTATGTCCTC 146858 ||||| || | |||||| | | |||| ||||| | ||| || || ||||||| Sbjct 6128375 GGGGTAAGGATTGTAGCCGACTATCTCAAAGTCTTCGTAGCGGAAGTCCTCGATGTCCTG 6128316 Query 146859 CACCCGCCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTT 146918 |||| | | | ||| ||||| |||||||| || || | | ||||||| || Sbjct 6128315 CACCTGGCGCTTGATCACCAGCTTAGGGAAGGGACGCGGCGTGCGCTCCAGCTGCTCCTT 6128256 Query 146919 CAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCC 146978 ||| |||||||| ||||| ||||||| ||||| ||| |||| ||||||||||||||| || Sbjct 6128255 CAGCGGCTCCACATGGTTCAGGTAGATGTGCGTGTCGCCCATGGTGTGCACAAAGTCTCC 6128196 Query 146979 CGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTT 147038 ||||| || || ||||| ||||| | ||||| ||||||||| | |||| ||| ||||| Sbjct 6128195 GGGCTTCAGACCCGTCACATGGGCGATCATGTGGGTGAGCAGGGCGTAGGAGGCGATGTT 6128136 Query 147039 GAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCC 147098 |||||| || |||||||||||||| | |||||||||||||||||| || ||||| || Sbjct 6128135 GAAGGGCACGCCCAGGCCCATGTCGGCGCTCCTCTGGTACAGCTGGCAGGAAAGCTCACC 6128076 Query 147099 G------TCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGG 147152 | || | ||||| ||||| |||| |||||| || || || ||||| || Sbjct 6128075 GCGCGTCTCTGAGACGTAGAACTGTGCCAGGCAGTGGCATGGAGGAAGGGCCATCTTTGG 6128016 Query 147153 CAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAAT 147212 | |||| || ||||| ||||| | | | |||||| | || || |||| || Sbjct 6128015 TATGTCCAGTGGATTCCATGCCGACATGATGATGCGCCTGTCCGAAGGATTATTCTTGAT 6127956 Query 147213 CTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCC-CGCAGT 147271 ||||| ||| | ||||||||| | ||||| ||| ||| | ||| |||| | Sbjct 6127955 GGTCTCGATCACCTGGCGCAGCTGGTCGATGCCCTTGCCGTTGTAATC-GTCGTCGCATT 6127897 Query 147272 CCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCG- 147330 ||||| |||||||| || | ||||||||||||||| || || |||||||||||| Sbjct 6127896 TGCCGTACTCCGCCCCAAAATGACGCCACTGGAAGCCGTATACCGGGCCCAGGTCGCCGA 6127837 Query 147331 -GGCTTTCTGTGCGAGAAGCCCGCCCGCTTG---AGAAACTCGGGGGACCCGTGGGCGTC 147386 ||| || | | | | || ||||| || ||||| || | || |||| Sbjct 6127836 CGGCGCGCTCCGTGTG-----CCCCAGCTTGTCCAGGAACTCCCTGGTGCTGTTCTCGTC 6127782 Query 147387 CCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCA 147446 ||||||| ||| ||| | ||| ||| | |||||| ||| | |||||| Sbjct 6127781 CCAGATGTGCACGTTCTTATCCTGCAGCAGCTTGGCGTCCGTCTTGCCTGCCACGAACCA 6127722 Query 147447 GAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAA 147503 |||||||||||| ||||| | | ||||| | ||||||||||||||| ||||| Sbjct 6127721 GAGCAGCTCCTCGGCCACCCCGCGAAAGAAGACGCGCTTGGTGGTCAGCAGCGGGAA 6127665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583424691552000