Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2 131 2e-25 seq3325 120 3e-22 seq1 113 4e-20 seq4812 111 1e-19 seq4563 111 1e-19 >seq2 Length=2985096 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || |||||||| || ||| |||||| || || ||||| |||| | Sbjct 124193 CCACCACGCAGACGCAGGACCAAATGCAAAGTAGACTCCTTCTGGATATTGTAGTCGGAC 124134 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || |||| |||| |||||| || || || ||||| ||||||||||| | ||| Sbjct 124133 AAAGTGCGTCCGTCCTCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGA 124074 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||||| |||||| ||||| | | | || ||| | || ||| Sbjct 124073 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTATCGGAAGGCTCAACC 124014 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| || || || |||| || ||||| || |||||||| Sbjct 124013 TCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 123967 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || |||||| || |||||||| |||| ||| || || | || || Sbjct 123948 CACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGTCCATCCTC 123889 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 || |||||| || || || |||| ||||||||||| | |||| || |||||||||| Sbjct 123888 CAACTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTG 123829 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 |||||| ||| | | | | | || ||| | || ||||||| ||||| || || Sbjct 123828 GATCTTGGCCTTAACATTCTCGATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTCTT 123769 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| |||||||| || || ||||| Sbjct 123768 GCCAGTCAGGGTTTTCACGAAAATTTGCAT 123739 >seq3325 Length=21082 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || || || |||||| |||||||||||||||| | Sbjct 20297 CCACCACGCAGACGGAGAACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAATCGGAC 20238 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| || || || || | |||||||| || | || Sbjct 20237 AGGGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGGGGG 20178 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || ||||||||| |||||| ||| | || | | ||||| | ||||||| Sbjct 20177 ATGCCCTCCTTGTCTTGGATCTTAGCCTTGACGTTTTCAATGGTGTCCGAAGGTTCCACC 20118 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 |||| ||||| || || || || | |||||| ||||| |||||||||| Sbjct 20117 TCCAGGGTGATGGTCTTGCCAGTAAGAGTTTTGACAAAGATCTGCATTC 20069 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||||| || || ||||| || ||||||||||||| | Sbjct 20753 CCACCACGCAGACGGAGAACCAAATGCAAAGTCGATTCCTTCTGGATGTTGTAATCGGAC 20694 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || |||| ||||| || || || || || ||||| |||||||| || | || Sbjct 20693 AGGGTGCGTCCGTCCTCCAGTTGTTTGCCGGCGAAGATCAATCGCTGCTGATCTGGGGGG 20634 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||||| |||||| ||||| | || | | ||||| | || || Sbjct 20633 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCTGATGGCTCAACT 20574 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 |||| ||||| || || || || | || || ||||| |||||||||| Sbjct 20573 TCCAAGGTGATGGTCTTGCCAGTAAGTGTCTTGACAAAGATCTGCATTC 20525 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||| |||| | | |||||| || | || |||||| || ||||||||||| | Sbjct 19843 TTCCACCGCGTAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAG 19784 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 ||| || || | || ||||||||||| || || || || | |||||||| || | | Sbjct 19783 ACAAAGTGCGACCATCCTCCAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGG 19724 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 | | | |||||||||| |||||| ||||| | | | | || || | || | Sbjct 19723 GGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTATCAGAAGGCTCAA 19664 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 | || | ||||| ||||| || |||||||| || ||||| |||||||||| Sbjct 19663 CTTCAAGAGTGATGGTTTTGCCGGTCAAAGTCTTGACAAAGATCTGCATTC 19613 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||| |||| | | |||||| || | || |||||| || ||||||||||| | Sbjct 20071 TTCCACCGCGTAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAG 20012 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 ||| || || | || ||||||||||| || || || || | |||||||| || | | Sbjct 20011 ACAAAGTGCGACCATCCTCCAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGG 19952 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 | | | |||||||||| |||||| ||||| | | | | || || | || | Sbjct 19951 GGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTATCAGAAGGCTCAA 19892 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 | || | ||||| ||||| || |||||||| || ||||| |||||||||| Sbjct 19891 CTTCAAGAGTGATGGTTTTGCCGGTCAAAGTCTTGACAAAGATCTGCATTC 19841 Score = 98.7 bits (108), Expect = 9e-16 Identities = 164/236 (69%), Gaps = 7/236 (3%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||| |||| | | |||||| || | || |||||| || ||||||||||| | Sbjct 21069 TTCCACCGCGTAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAG 21010 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 ||| || || | || ||||||||||| || || || || | |||||||| || | | Sbjct 21009 ACAAAGTGCGACCATCCTCCAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGG 20950 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC-----GCTC-- 35680 | | | |||||||||| ||| || ||| | || | | ||||| |||| Sbjct 20949 GGATTCCCTCCTTGTCCTGGATTTTCGCCTTTACGTTTTCAATAGTGTCCGAAGGCTCTT 20890 Query 35681 GATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | |||||||| | ||||| || || || |||||||| || || || |||||||| Sbjct 20889 GGCTCCACCTCAAGAGTGATTGTCTTTCCGGTCAAAGTCTTTACGAAAATCTGCAT 20834 >seq1 Length=22559587 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || |||||| |||| ||||||||||| || || || Sbjct 1136980 CTCCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAA 1137039 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| || | || | | |||||||||| |||||| ||||| | | Sbjct 1137040 GATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATT 1137099 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| | |||||||||| ||||| || || || || | |||||||| Sbjct 1137100 CTCGATGGTGTCCGAAGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCAC 1137159 Query 35725 AAATATCTGCAT 35736 || || ||||| Sbjct 1137160 GAAGATTTGCAT 1137171 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || |||||| || || || |||||| |||||||| || || | Sbjct 20155547 CCACCACGCAGGCGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGAG 20155488 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || ||||||||||| || || || |||| |||||||| || | |||| Sbjct 20155487 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 20155428 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | || |||||| ||||| || | | || | | || || | ||| ||| Sbjct 20155427 ATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACC 20155368 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTG 35742 || | ||||| || || ||||| | || ||||| || |||||||| |||| Sbjct 20155367 TCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATCTTGTG 20155315 >seq4812 Length=908733 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||||| || || |||||| |||||||||||||||| | Sbjct 620059 CCACCACGCAGACGGAGAACCAAATGCAAGGTCGACTCCTTCTGAATGTTGTAATCGGAC 620118 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || || |||||||| || || || || | |||||||| || | ||| Sbjct 620119 AAAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGGGGA 620178 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| |||||| || | || | | ||||| | |||||| Sbjct 620179 ATACCCTCCTTGTCTTGGATCTTGGCTTTGACGTTTTCAATGGTGTCTGAAGGCTCCACC 620238 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 |||| ||||| || || || || | |||||| || || |||||||||| Sbjct 620239 TCCAGGGTGATGGTCTTGCCAGTAAGAGTTTTGACGAAGATCTGCATTC 620287 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | || ||| || |||| ||||| ||||| || || || Sbjct 619866 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCGTCCTCCAGTTGCTTGCCGGCGAA 619925 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | ||||||||| |||||| ||| | | Sbjct 619926 GATGAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTGACGTT 619985 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | || || | || || |||| || || || || || |||||||| ||||| Sbjct 619986 TTCAATGGTATCAGAAGGCTCGACTTCCAGAGTAATGGTCTTTCCGGTCAAAGTCTTCAC 620045 Query 35725 AAATATCTGCAT 35736 || || ||||| Sbjct 620046 GAAGATTTGCAT 620057 >seq4563 Length=14502029 Score = 111 bits (122), Expect = 1e-19 Identities = 198/289 (69%), Gaps = 0/289 (0%) Strand=Plus/Minus Query 44131 TGTGGAACGCTGCCCAAACACAACTGTTGCGAGAAGGTAAAATGCACCAATACATGCGTA 44190 |||||||| | || ||| || ||| |||| || || |||||||| | |||| | Sbjct 8077024 TGTGGAACTCGGCGCAACTGCAGCTGGTGCGCGAGGGCAAAATGCATGGCTTTCTGCGCA 8076965 Query 44191 TGTATTGGTGCAAGAAGATATTGGAGTGGTCGGAAGATGCGCAAACCGCGCTCGTTCATG 44250 |||| ||| ||||||||| | |||||| | | | | || || | ||| Sbjct 8076964 TGTACTGGGCCAAGAAGATTCTCGAGTGGACCGCCACCCCTGAGGAGGCACTGGAATATG 8076905 Query 44251 CCATCTATCTGAACGACAAGTACAGTTTGGACGGTCGCGACCCCAACGGGTACGTAGGAT 44310 | || ||||| ||||||||||| | || || ||||| ||||| || || || || | Sbjct 8076904 CGATTCTCCTGAATGACAAGTACAGCCTCGATGGACGCGATCCCAATGGATATGTCGGCT 8076845 Query 44311 GTATGTGGTCCATTTGCGGTGTCCACGACAGGGCGTGGCGAGAGCTACCCATCTACGGCA 44370 | |||||||||||| | || ||||||||| || ||| |||| |||| | ||||| Sbjct 8076844 GCATGTGGTCCATTGGGGGAATCCACGACATGGGCTGGAAGGAGCGGGCCATTTTCGGCA 8076785 Query 44371 AAGTGCGCTACATGAACTACAACGGTTGCGTCAGAAAGTTTGATGTAAA 44419 | || || ||||||||||| | || ||| | ||||| ||||| || Sbjct 8076784 AGGTTCGATACATGAACTATCAGGGGTGCAAGCGCAAGTTCGATGTTAA 8076736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450744688894400