Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq1 430 2e-115
seq4563 116 5e-21
>seq1
Length=22559587
Score = 430 bits (476), Expect = 2e-115
Identities = 1242/1891 (66%), Gaps = 40/1891 (2%)
Strand=Plus/Plus
Query 68361 ATCCTTATCCAATGTAAACTGAATGG-GTGAGGATGCGGGTTTTGTACGTAGATAGTACA 68419
|| ||| || | || |||||||| | || | | || || ||||| || || || ||||
Sbjct 20041581 ATTCTTGTCTACAGTGAACTGAATAGCGTTTGCA-GCTGGCTTTGTGCGCAGGTAATACA 20041639
Query 68420 TACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAAC 68479
| || ||||| ||||| |||| || || || || || ||||| ||
Sbjct 20041640 TTCCAGTTTTTAGACCAGCTTTCCAGGAATAAAAGTGTATGGAAGTAAGTTTTCCGTAGT 20041699
Query 68480 TTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTG 68539
|||| || || | |||||| || | ||| ||||| ||||| || || || |||| |||||
Sbjct 20041700 TTGGCTCTGCCACATGAATGTTGAACGACTGACTCTGATCTATAAACGCACCTCGATCTG 20041759
Query 68540 CCGCCATTTTTATAATACTCTTT--TGAGGAATTTCCCAAATAGTCTT--AAAAATCTGT 68595
| ||||| || ||| | |||| |||| |||||||| | ||| || | | |||
Sbjct 20041760 CGGCCATCTTAATAGTGGACTTTACTGAG--ATTTCCCACACAGTTTTGTACAGATCGC- 20041816
Query 68596 TTGATATCATCTGG---AAGGC-TCG-TATTTTGAATGGATCCACCATCGGATATAATTA 68650
|| | | ||||| | ||| || ||||||| || || || | ||| || |||
Sbjct 20041817 --GA-ACCTTCTGGGGGATGGCCTCAATATTTTGGATTGAGCCCCTGCTGGAAATGATTT 20041873
Query 68651 TATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGAT 68710
||||| || || || | |||||| | |||||||| | || | | ||| | |
Sbjct 20041874 GGTTCTTCATATCGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGT 20041933
Query 68711 TAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTT 68770
|||| | ||| ||||| ||||| | |||| | || |||||||| | || || || |
Sbjct 20041934 TAACCACTTGGAATTCTCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTAAGGCT 20041993
Query 68771 CCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCA 68830
| | ||||| || || |||| |||||||||||| || ||||| |||||||| || ||||
Sbjct 20041994 CGAATGATTCGTTGTTACCCATAATTTGAGCAGTAGAAGCAGTGGGCATAGGAGCAACCA 20042053
Query 68831 ATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAA 68890
| | || | | ||| || | |||| || || || | | ||| |||||||
Sbjct 20042054 ACAGGGAGTTCCGGACACCGTGCTTCTTGATGGACTCCTTCAGTTTCTGCCAGTCCCAAA 20042113
Query 68891 GATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATC 68950
| | | ||| | | ||| | ||||| || |||||||| || || | ||
Sbjct 20042114 GGTTCGTTGGCTCTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTC 20042173
Query 68951 CATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCAC 69010
| | ||| |||||||| || ||||| | || ||||||||||| || || || || |
Sbjct 20042174 CCTCATAGGTTTCATATGGACCTTCGATCTGGGCCAGTTCACAACTGGCTTCCAAAGCGC 20042233
Query 69011 CGTAATAAATTGTTTCGAAAATCTTCTTATT-GAGATCTTGTGCTTCTAGACTATCGAAT 69069
|||| || || ||||||||||||| || ||| ||| | ||||| ||| || |
Sbjct 20042234 CGTAGTAGATAGTTTCGAAAATCTGCTGATTCAAGAGGCCG-GCTTCATCACTTTCATAG 20042292
Query 69070 GGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTA 69129
|| | | | ||||| || || || || |||||||| || || || || | || | |
Sbjct 20042293 GGGAACCGCATGAGAATCAAGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGA 20042352
Query 69130 TGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 69189
|| ||| ||| || | | || ||||| | || || | |||||||| || || ||
Sbjct 20042353 TGCCTCAAATTGGATTTCTTGGCCTCTGGCAGGGGGTAGAAGTTAATATCGATTATCTTG 20042412
Query 69190 TTAAGATT-TCGGACTACTACTT--TAACCACGTCCTTTAGTTTGAGAAAATCAAATCGT 69246
|||||||| | || | ||| || || ||||| ||||| ||||| || ||
Sbjct 20042413 TTAAGATTCTTGGTAACCGTCTTGGTA---ACTTCCTTAAGTTTCTTGAAATCGTAT-GT 20042468
Query 69247 CCATCT-----ATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCT 69301
| ||| | |||||||| || || || | ||||| | || |||||||| | ||
Sbjct 20042469 -CTTCTCGGGAGTGACAAACATGTTGAGGGCGATGGATGCCAAGTTGCAAACTGCAATCT 20042527
Query 69302 CATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCA 69361
||| | | | ||| | || || ||||| || | ||| ||||| ||||| || || |
Sbjct 20042528 CATCCGGAGCGGAATACTCTACGATTTCTGTGCACAAATTGCTACACTTGATGGTGCCGA 20042587
Query 69362 GATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAG 69421
||| ||||| || ||||| |||| ||||| ||||| | | || | || | ||||
Sbjct 20042588 CATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCCTTAAACAACATGTAGGGGTTTCCAG 20042647
Query 69422 TTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGT 69481
|||| | ||| | ||| ||||| | ||| | | ||| || | | |||
Sbjct 20042648 TTTCGACCTGTGCTTCAATAATGGCAAACCACAGGGATTGAGCCTTAACAGTTCTGTTGG 20042707
Query 69482 AACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCAT 69541
||| ||||| ||||||| ||| | | |||||||||||| ||||| ||||| |
Sbjct 20042708 CACGACCCTCTTGCTCATATTTCTCATACAACTTTTCGAATTCATCGCCCCACACATCGT 20042767
Query 69542 CCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTT 69601
| ||||| |||| || ||| ||||| | ||||| | ||| ||| || || |
Sbjct 20042768 GAAGCCCAGGGCATTTATGTGGGCACATTAGCGACCAATCTCCATTGGCCTCGACGCGCT 20042827
Query 69602 TCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCAT 69661
||||||| |||||||| ||||| || || ||| ||||| | || | |||||| || |
Sbjct 20042828 TCATAAAGAGATCGGGTATCCACAGGGCGTAAAACAGATCGCGGGCCCGATTTTCCTCCT 20042887
Query 69662 TTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGAT 69721
| || || ||||| ||||| || || ||||| | | ||| || ||||| || || || |
Sbjct 20042888 TGCCGGTGTTTTTCTTAAGTTCCAGGAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGT 20042947
Query 69722 ATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTAT 69781
| || || | | | || || || || ||||| ||||| | || | || || |
Sbjct 20042948 AAATGGCAAAGGCACCGGGACGCTTGCCACCTCCTTGATCCACATAACGCGCCACATTGT 20043007
Query 69782 TATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAAC 69841
| |||| |||| ||| |||| | ||||| ||| | ||||| ||||| |||| |
Sbjct 20043008 TGAAGACCCTCAACATGGGAACCAAGCCATTGGATGTGCCATTCGTTCCGCAAATCGAGG 20043067
Query 69842 TTCCTCTTGCGCGAATATTACTAATAGA----TAGACCTATTCCTCCTGCCATTTTAGAG 69897
| || |||| || || ||| || || || || || || ||| ||| |||
Sbjct 20043068 TGCCCTTTGCCCGGAT----GCAATGGACGTTAAGTCCAATGCCGCCGGCCGATTTCGAG 20043123
Query 69898 ATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTA 69957
|| | ||||| ||| || | | | | || ||||| || || | ||||| |
Sbjct 20043124 ATCAAGGCACACTGTTCCACGGACTTAAAAATGCCCTCGATAGAGTCGGCCGTCATGGTC 20043183
Query 69958 AGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGAT 70017
| || || || |||| || | | | || | || ||| | ||| || ||
Sbjct 20043184 AAGAGGAAGCAAGACGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGTGTTGGCGAC 20043243
Query 70018 GCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCC 70077
|| || ||||| || || || | ||||| || ||||| | || | |||||||||
Sbjct 20043244 GCATGCGTGAAGTATCGCTCCGACAAGAGATTATAAGTTTCCACGGCCGCATCTATATCC 20043303
Query 70078 CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTA 70137
| ||| ||||| ||||| || |||||||||||||| || || || ||| | ||||
Sbjct 20043304 TCCCCATGGATTCCGATCGCCACGCGCATCAACATATGTTGCGGACGCTCTGCAATTTTT 20043363
Query 70138 TTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAA 70197
||| | |||| ||| || || ||| || || ||||||||||| ||||| || |
Sbjct 20043364 CCGTTTCTCTTCAGCAGATAGGAACGTTCTAGGGTCTTAAACCCAAAGTAGTTATACCCA 20043423
Query 70198 AAGTCTCTTTCGTAAATAATAACAGAATTTA 70228
||||| | ||||| || ||| ||| ||||
Sbjct 20043424 AAGTCGCGGTCGTAGATTATAGAAGAGTTTA 20043454
>seq4563
Length=14502029
Score = 116 bits (128), Expect = 5e-21
Identities = 470/734 (64%), Gaps = 11/734 (1%)
Strand=Plus/Minus
Query 39317 ACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAAT 39376
|||||||| ||||| || || || ||||| || || || || || || ||||
Sbjct 3739895 ACTCCCATGCGCTGGTACTCGCCCACCTTCTTCTCAAAGAAGTTCGTCTTTCCGTCCAGC 3739836
Query 39377 GATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAAT 39436
|| || | |||||||| | ||| || || | | ||| || |||| || | ||
Sbjct 3739835 GAGATCATCTCCATGAAGTTAAAGGGGTTCTTGGTATTGTAGATTTTGCCAACGCTCAAC 3739776
Query 39437 TCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATT 39496
|| | || || || || || ||||| ||||| ||| | || || |||||
Sbjct 3739775 TCCACCAGCAGTCGGTCCGCCACGAATTCAATGTACTGCGACATAAGATCGCAGTTCATG 3739716
Query 39497 CCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCT 39556
|| ||||| || || || | || || |||| ||||| | || ||| | || || ||
Sbjct 3739715 CCGATGAGGTTTACGGGCAAGGCATCGGTTAAGAACTCCTGCTCAATGGCCACCGCATCG 3739656
Query 39557 GTTATTATC--GATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTA 39614
|| ||| |||| | | ||| || ||| | |||| || || | ||||| |
Sbjct 3739655 CGGATGATCTCGATGATGCG--CTCGCGCCTGGGTCGCTGCACCAAGTGCTGGAACATCA 3739598
Query 39615 AGCA-GGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673
||| ||| ||||| ||||| | |||||| || | || | ||||| || || ||
Sbjct 3739597 -GCACGGCAAAGTCGCAATGCAAGCCCTCGTCGCGGGAGATAAGCTCGTTGGAGAAGGTC 3739539
Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAG 39733
||||| ||||| ||||| ||||| || ||||| || |||| ||||| || |||
Sbjct 3739538 AGTCCCGGCATCAGACCGCGCTTCTTCAGCCAGAAAATGGAGGCAAAGCTGCCGCTGAAG 3739479
Query 39734 AAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATG- 39792
|||||||| || || || || || |||| | | ||| ||| || ||| ||| |
Sbjct 3739478 AAGATGCCCTCGACGGCAGCGAAGGCAATGATGCGCTCCCCG-AAATTGGCCGATTTGGA 3739420
Query 39793 ---TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGC 39849
||||| | ||||| || || || ||| ||| |||||||| || || ||
Sbjct 3739419 GGAGATCCAGGAAAGGGCCCAGTCCGCCTTGCGCTTCACAGCCGGCATTGTCTCGATGGC 3739360
Query 39850 ATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATA 39909
|| || || || | | || ||| | || || || || | || ||| ||
Sbjct 3739359 GTTGAACAGGTAGTCCCGCTGATGCGGATCCCGGATGTAAGTGTCGATCAGCACACTGTA 3739300
Query 39910 CATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGT 39969
|||||| || || | ||| || || || || || || || || || || | || || ||
Sbjct 3739299 CATTTCCGAGTGCACGTTCTCCATGGCGATTTGGAAGCCATAGAAGCACCGAGCCTCCGT 3739240
Query 39970 AATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGC 40029
|| || ||||| || || | ||| ||| || || ||||| || ||||| ||
Sbjct 3739239 GATCTGCACCTCCTGACTGAAGCGCTCCACCAGGTTCTCGTTCACGATGCCATCGGATGC 3739180
Query 40030 GGCAAAAAATGCCA 40043
|||||| || ||||
Sbjct 3739179 GGCAAAGAAGGCCA 3739166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686834270395200
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