Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq1 239 4e-58
seq4812 122 7e-23
seq3325 113 4e-20
seq2 113 4e-20
>seq1
Length=22559587
Score = 239 bits (264), Expect = 4e-58
Identities = 994/1556 (64%), Gaps = 27/1556 (2%)
Strand=Plus/Plus
Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465
|| || || ||||| ||||| || || | || ||||| ||||||| |||||||| ||
Sbjct 20041585 TTGTCTACAGTGAACTGAATAGCGTTTGCAGCTGGCTTTGTGCGCAGGTAATACATTCCA 20041644
Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTGGTAATTGGGT 130525
||||| || ||| ||| |||| ||| ||| | | || ||| || ||
Sbjct 20041645 GTTTTTAGACCAGCTTTCCAGGAATAAAAGTGTATGGAAGTAAGTTTTCCGTAGTTTGGC 20041704
Query 130526 TGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCC 130585
| ||||| ||||||| ||| || ||||| ||||| || || | ||||| |||
Sbjct 20041705 TCTGCCACATGAATGTTGAACGACTGACTCTGATCTATAAACGCACCTCGATCTGCGGCC 20041764
Query 130586 ATGTCGAGCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTGT 130645
|| | | ||| || | || ||||| | || ||||| ||||| | || |
Sbjct 20041765 ATCTTAATAGTGGACTTTACTGAGATTTCCCACACAGTTTTGTACAGATCGCGAACCTTC 20041824
Query 130646 TTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGCATA 130705
| ||| ||| | |||| ||| | || || ||| || |||| ||| ||||
Sbjct 20041825 TGGGGGATGGCCTCAATATTTTGGATTGAGCCCCTGCTGGAAATGATTTGGTTCTTCATA 20041884
Query 130706 CTTTTATCGTACAATCCAAGCTGTACAAGATCTTTTACCAAATGATTATTAATGATTTGA 130765
| || |||| | |||| || || ||| |||||||| |||| | |||
Sbjct 20041885 TCGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTAACCACTTGG 20041944
Query 130766 AAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTCG 130825
|| || |||| ||| || || || ||||| || | ||| | || || || ||||||
Sbjct 20041945 AATTCTCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTAAGGCTCGAATGATTCG 20042004
Query 130826 TTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATTA 130885
||||| || | ||||| || |||| || |||||||| || || || || || ||
Sbjct 20042005 TTGTTACCCATAATTTGAGCAGTAGAAGCAGTGGGCATAGGAGCAACCAACAGGGAGTTC 20042064
Query 130886 CGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAGGT 130945
|| | ||||||| || |||| ||||| || | ||| ||||| || || ||
Sbjct 20042065 CGGACACCGTGCTTCTTGATGGACTCCTTCAGTTTCTGCCAGTCCCAAAGGTTCGTTGGC 20042124
Query 130946 TTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGATTCGAAC 131005
| | |||| |||||| || | || || || ||||| || |||| || || |
Sbjct 20042125 T---CTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCTCATAG 20042181
Query 131006 GATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAA 131065
| ||| || ||||||| | ||||| || || ||||||||||| ||||| ||
Sbjct 20042182 GTTTCATATGGACCTTCGATCTGGGCCAGTTCACAACTGGCTTCCAAAGCGCCGTAGTAG 20042241
Query 131066 ATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGGAAATTTC 131125
|| |||||| ||| || | ||| || | |||| | || || || || || |
Sbjct 20042242 ATAGTTTCGAAAATCTGCTGATTCAAGAGGCCGGCTTCATCACTTTCATAGGGGAACCGC 20042301
Query 131126 ATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTATGTTTTAAA 131185
|| | ||| || ||||| |||| ||||| | || | |||||| || | ||| | |||
Sbjct 20042302 ATGAGAATCAAGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGATGCCTCAAA 20042361
Query 131186 TTACATTTACGCGAACATTCG-GTGGGATAAAGGTTAATGTCAATTATTTTGTTTAAATT 131244
|| |||| | | | | | ||| || | |||||| || ||||| ||||| | |||
Sbjct 20042362 TTGGATTT-CTTGGCCTCTGGCAGGGGGTAGAAGTTAATATCGATTATCTTGTTAAGATT 20042420
Query 131245 GCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTGCCAGTTTCGAG 131304
|| | | || || || | ||| | |||||| | || | ||| |
Sbjct 20042421 CTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTTGAAATCGTATGT---CTTCTCGGG 20042477
Query 131305 GTTTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCCGTTTCGTCATAATC 131364
| ||||| || | || || |||| || |||||||| | || || | |
Sbjct 20042478 AGTGACAAACATGTTGAGGGCGATGGATGCCAAGTTGCAAACTGCAATCTCATCCGGAGC 20042537
Query 131365 GCAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCCAAATTTTGTTG 131424
| |||||| || ||||| | ||||||||| || | ||| |||||||| | ||| || ||
Sbjct 20042538 GGAATACTCTACGATTTCTGTGCACAAATTGCTACACTTGATGGTGCCGACATTCTGCTG 20042597
Query 131425 ATTGCTTTTAGCATTCACATG-GTCCTTGTACATCATGTAGGGCGTGCCCGTTTCGACTT 131483
||||| || | | || | ||||| ||| ||||||||| | || |||||||| |
Sbjct 20042598 GTTGCTCTT-CCTGTTGCAGGCATCCTTAAACAACATGTAGGGGTTTCCAGTTTCGACCT 20042656
Query 131484 GAGTTTCAATAATG--TATCGAAAGAGTTTTCGAGCAGACAATTGATATTTGTATTGGC- 131540
| | |||||||||| | | | || | || |||| || | | || | |||||
Sbjct 20042657 GTGCTTCAATAATGGCAAACCACAGGGATT--GAGC-----CTTAACAGTTCTGTTGGCA 20042709
Query 131541 CG--CGTTTT--TCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAAACGAACTGTCC 131596
|| | | || || || || || |||||| |||| || | | ||| || | ||
Sbjct 20042710 CGACCCTCTTGCTCATATTTCTCATACAACTTTTCGAATTCATCGCCCCACACATCGTGA 20042769
Query 131597 AAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTC 131656
| || |||| || |||||||||||||| | || || || || ||||||
Sbjct 20042770 AGCCCAGGGCATTTATGTGGGCACATTAGCGACCAATCTCCATTGGCCTCGACGCGCTTC 20042829
Query 131657 ATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTA 131716
||||| | ||| || | ||| | ||||| |||||||| | || || || || |
Sbjct 20042830 ATAAAGAGATCGGGTATCCACAGGGCGTAAAACAGATCGCGGGCCCGATTTTCCTCCTTG 20042889
Query 131717 CCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATAC 131776
|| | |||| || | | | || || || | |||| |||||||| |||| ||
Sbjct 20042890 CCGGTGTTTTTCTTAAGTTCCAGGAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAA 20042949
Query 131777 ACTGCCATTGCGCCTTTGCGCTT---ACCGCCTTGATTAACATGACGAACCATGTTGTTG 131833
| || | || || ||||| ||| ||||||| |||| ||| ||| ||||||
Sbjct 20042950 ATGGCAAAGGCACCGGGACGCTTGCCACCTCCTTGATCCACATAACGCGCCACATTGTTG 20043009
Query 131834 TATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTG 131893
| || | ||||||||| |||| || |||| | ||||| || | ||| || ||
Sbjct 20043010 AAGACCCTCAACATGGGAACCAAGCCATTGGATGTGCCATTCGTTCCGCAAATCGAGGTG 20043069
Query 131894 CCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGAT 131949
|| || || | ||| || ||||| |||||||| || ||| | |||| |||||
Sbjct 20043070 CCCTTTGCCCGGATGCAATGGACGTTAAGTCCAATGCCGCCGGCCGATTTCGAGAT 20043125
Score = 98.7 bits (108), Expect = 8e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| ||||||| || | |||| || | || || || || || || ||||||||| |
Sbjct 1136945 CCACCGCGCAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 1137004
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | || |||| || ||||| || |||||| | || |||||||| ||||| || ||
Sbjct 1137005 AGGGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGG 1137064
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGT-GGCTTCAAC 27199
| ||||| || || ||||||| |||| | || | ||||| | |||| || |
Sbjct 1137065 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCACC 1137124
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| | || || || | ||||| || || |||||||| |||||||||||
Sbjct 1137125 TCCAAG-GTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 1137171
>seq4812
Length=908733
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || |||| || | |||||||| || || || || || ||||| ||||| ||| |
Sbjct 620059 CCACCACGCAGACGGAGAACCAAATGCAAGGTCGACTCCTTCTGAATGTTGTAATCGGAC 620118
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| |||| | || || ||||| || |||||| | ||||||||||| ||||| || ||
Sbjct 620119 AAAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGGGGA 620178
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| |||||| || || ||||||| ||| | | |||| | ||||||| | || ||
Sbjct 620179 ATACCCTCCTTGTCTTGGATCTTGGCTTTGACGTTTTCAATGGTGTCTGAAGGCTCCACC 620238
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || || | ||||| || |||||||| || ||||| |||||
Sbjct 620239 TCCAGGGTGATGGTCTTGCCAGTAAGAGTTTTGACGAAGATCTGCAT 620285
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || || || |||||||| || | |||| |||| || || || || |||
Sbjct 619861 GTCGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCGTCCTCCAGTTGCTTGCCG 619920
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | ||||||||||| || || || || | ||||| || || ||||||| ||
Sbjct 619921 GCGAAGATGAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTG 619980
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | |||| | || || | | || ||||| ||||| || | || || |||| |||
Sbjct 619981 ACGTTTTCAATGGTATCAGAAGGCTCGACTTCCAGAGTAATGGTCTTTCCGGTCAAAGTC 620040
Query 27231 TTCACAAAGATTTGCATA 27248
||||| ||||||||||||
Sbjct 620041 TTCACGAAGATTTGCATA 620058
>seq3325
Length=21082
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || |||| || | ||||| || || || || || || ||||| ||||| ||| |
Sbjct 20297 CCACCACGCAGACGGAGAACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAATCGGAC 20238
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | |||| | || || ||||| || |||||| | ||||||||||| ||||| || ||
Sbjct 20237 AGGGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGGGGG 20178
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||| || || |||||| || | | |||| | ||||| | | ||| ||
Sbjct 20177 ATGCCCTCCTTGTCTTGGATCTTAGCCTTGACGTTTTCAATGGTGTCCGAAGGTTCCACC 20118
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || || | ||||| || |||||||| |||||||| |||||
Sbjct 20117 TCCAGGGTGATGGTCTTGCCAGTAAGAGTTTTGACAAAGATCTGCAT 20071
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| ||||| | || | ||||| || | || || || || || || ||||| || |
Sbjct 19841 CCACCGCGTAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAC 19782
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| |||| | || || ||||| || |||||| ||||||||||||| ||||| || ||
Sbjct 19781 AAAGTGCGACCATCCTCCAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGGGG 19722
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||| || || ||||||| |||| | || | || || | | ||||||
Sbjct 19721 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTATCAGAAGGCTCAACT 19662
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| ||||| || | |||||| |||| ||| || |||||||| |||||
Sbjct 19661 TCAAGAGTGATGGTTTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 19615
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| ||||| | || | ||||| || | || || || || || || ||||| || |
Sbjct 20069 CCACCGCGTAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAC 20010
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| |||| | || || ||||| || |||||| ||||||||||||| ||||| || ||
Sbjct 20009 AAAGTGCGACCATCCTCCAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGGGG 19950
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||| || || ||||||| |||| | || | || || | | ||||||
Sbjct 19949 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTATCAGAAGGCTCAACT 19890
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| ||||| || | |||||| |||| ||| || |||||||| |||||
Sbjct 19889 TCAAGAGTGATGGTTTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 19843
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| ||||||| || | ||||| || | || || || || || || ||||||||| |
Sbjct 19613 CCACCGCGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 19554
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | |||| |||| || || ||||| |||||| | || |||||||| ||||| || ||
Sbjct 19553 AGGGTGCGTCCGTCCTCCAGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGG 19494
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||| ||||| ||| ||| |||| | || | || || | || || ||
Sbjct 19493 ATGCCCTCCTTATCCTGGATTTTGGCCTTCACATTCTCAATCGTATCGGAGGGCTCCACC 19434
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| | ||| || | || || |||| || ||||||||||| |||||
Sbjct 19433 TCCAAAGTAATGGTCTTTCCAGTCAAGGTCTTCACAAAGATCTGCAT 19387
>seq2
Length=2985096
Score = 113 bits (124), Expect = 4e-20
Identities = 164/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079
||| || |||| |||| |||||||| || ||||| || || || ||||||||||||
Sbjct 124194 GCCACCACGCAGACGCAGGACCAAATGCAAAGTAGACTCCTTCTGGATATTGTAGTCGGA 124135
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
|| |||| |||| || | ||| || |||||| | || | |||||| || || || ||
Sbjct 124134 CAAAGTGCGTCCGTCCTCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGG 124075
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| ||||| || || ||||||| |||| | | || | || || | | |||||
Sbjct 124074 AATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTATCGGAAGGCTCAAC 124015
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251
|| | ||| || | ||||| ||||| || ||||| ||||| |||||| ||
Sbjct 124014 CTCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATACCT 123963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424889447252160
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