Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq4563 161 1e-34
>seq4563
Length=14502029
Score = 161 bits (178), Expect = 1e-34
Identities = 304/442 (69%), Gaps = 4/442 (1%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
|| || || ||| |||||| |||||||| ||||| ||||||| ||| |||||||
Sbjct 3739880 TACTCGCCCACCTTCTTCTCAAAGAAGTTCGTCTTTCCGTCCAGCGAGATCATCTCCATG 3739821
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGCA-CTCCAATCTGTTTGAGGAGACG 129846
|| | ||| |||||||| | || | ||| || || | | | || || || ||
Sbjct 3739820 AAGTTAAAGGGGTTCTTGGTATTGTAGATTT-TGCCAACGCTCAACTCCACCAGCAGTCG 3739762
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
|||| ||| | |||||||||| ||||| ||| ||||||| |||||||||||
Sbjct 3739761 GTCCGCCACGAATTCAATGTACTGCGACATAAGATCGCAGTTCATGCCGATGAGGTTTAC 3739702
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
|| | || || | |||| ||| ||||||| |||| || || || | ||| ||
Sbjct 3739701 GGGCAAGGCATCGGTTAAGAACTCCTGCTCAATGGCCACCGCATCGCGGATGATCTCGAT 3739642
Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGT-CTTGAAGAGTTCCACGGCAAACTCCT 130025
||| || || ||| || ||| | |||| || ||| | ||||||||| ||
Sbjct 3739641 GATGCGCT-CGCGCCTGGGTCGCTGCACCAAGTGCTGGAACATCAGCACGGCAAAGTCGC 3739583
Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085
|| | |||||||| |||||||| || || || |||||| ||| || ||||| ||||
Sbjct 3739582 AATGCAAGCCCTCGTCGCGGGAGATAAGCTCGTTGGAGAAGGTCAGTCCCGGCATCAGAC 3739523
Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145
| |||||||||| ||||||||| | ||| ||| ||||||||| ||||| ||
Sbjct 3739522 CGCGCTTCTTCAGCCAGAAAATGGAGGCAAAGCTGCCGCTGAAGAAGATGCCCTCGACGG 3739463
Query 130146 ACGCGAACGCAAAGAGACGCTC 130167
||||| |||| || |||||
Sbjct 3739462 CAGCGAAGGCAATGATGCGCTC 3739441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618368099780800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |