Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 1e-15
seq4563 86.0 7e-12
>seq1
Length=22559587
Score = 98.7 bits (108), Expect = 1e-15
Identities = 171/246 (70%), Gaps = 2/246 (1%)
Strand=Plus/Minus
Query 168457 ATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATT 168516
|||||| || ||| | | || ||||| |||||||| | ||||| || ||||| |||||
Sbjct 4077376 ATCCTTGCCGCCCGTCAAGCGAGTACCGAACTGACCGCGTGGCTCCAGGAGATTTATATT 4077317
Query 168517 GTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTG-TCCGCGAGAGAGACTTCAC 168575
|||| |||| |||| | |||| || || || || || || || || || ||||
Sbjct 4077316 ATTTGCGCCCACATAGTTCTGGGCCAGATTAACGATGGTCATCTGC-AGCGAAACCTCAC 4077258
Query 168576 CGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCAT 168635
||||||| || || | |||| ||||| | | | || ||| ||||| || | ||||
Sbjct 4077257 CGTGGTGATAGGCCGACATCTCGGCGACGGAACCAGACAGCTGGGCCACCTTAACCTCAC 4077198
Query 168636 CCTTGAGATTCTTGTGGAAGCATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCAT 168695
|||| ||| | | |||||| | | |||| |||||||| || ||||| | || |
Sbjct 4077197 GCTTGTCGTTCCTCTTGAAGCAGGTGAACATCACCTTGCGCTGACCTGGCTTCAAGCCGT 4077138
Query 168696 CCGCCA 168701
|| |||
Sbjct 4077137 CCACCA 4077132
>seq4563
Length=14502029
Score = 86.0 bits (94), Expect = 7e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 94887
|| ||||| ||||||||| || ||| | | |||| ||||| |||||||| |||
Sbjct 3739465 GTCGAGGGCATCTTCTTCAGCGGCAGCTTTGCCTCCATTTTCTGGCTGAAGAAGCGCGGT 3739524
Query 94888 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937
|| ||||| || || ||||||||||||||||||||| || ||||||||
Sbjct 3739525 CTGATGCCGGGACTGACCTTCTCCAACGAGCTTATCTCCCGCGACGAGGG 3739574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583197516203200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |