Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq3325 172 5e-38
seq4812 163 2e-35
seq4563 154 1e-32
seq1 140 3e-28
>seq3325
Length=21082
Score = 172 bits (190), Expect = 5e-38
Identities = 176/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| |||||||| || |||||| | || || || || |||||||| ||
Sbjct 20071 ATGCAGATCTTTGTCAAAACTCTTACTGGCAAGACCATCACCCTGGAGGTGGAACCTTCG 20130
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || || |||||||| || ||||| || || |||||
Sbjct 20131 GACACCATTGAAAACGTCAAGGCTAAGATCCAAGACAAGGAGGGCATCCCCCCAGATCAG 20190
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | |||||| || || | || || || ||| | ||||||||||||
Sbjct 20191 CAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACCCTGTCCGATTACAAC 20250
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||||||||| || |||||| | ||| |||| ||||| ||
Sbjct 20251 ATTCAGAAGGAGTCGACCTTGCACTTGGTTCTCCGTCTGCGTGGTGGTAT 20300
Score = 158 bits (174), Expect = 1e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| || ||| | |||||| | || ||||| || |||
Sbjct 19387 ATGCAGATCTTTGTGAAGACCTTGACTGGAAAGACCATTACTTTGGAGGTGGAGCCCTCC 19446
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| ||||||||| || || ||||| || || || || ||||| || || |||||
Sbjct 19447 GATACGATTGAGAATGTGAAGGCCAAAATCCAGGATAAGGAGGGCATCCCCCCAGATCAG 19506
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||||||||||| |||| ||| | ||| | ||||| ||||||
Sbjct 19507 CAGCGTCTTATCTTCGCCGGCAAACAACTGGAGGACGGACGCACCCTGTCCGACTACAAC 19566
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||| | || ||||| | ||| |||| ||||| ||
Sbjct 19567 ATCCAGAAGGAGTCGACCCTCCACTTGGTCCTCCGTCTGCGCGGTGGAAT 19616
Score = 158 bits (174), Expect = 1e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| ||||||| ||| | || ||||||||||| || || ||
Sbjct 20299 ATGCAGATTTTCGTCAAGACTTTGACCGGAAAGACCATCACTCTTGAAGTAGAGCCTTCG 20358
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || ||||| || ||||| || ||||| || || |||||
Sbjct 20359 GACACTATTGAAAACGTAAAGGCTAAAATCCAGGACAAGGAGGGCATCCCCCCAGATCAG 20418
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||||||||||| |||| ||| | ||| | ||||| ||||||
Sbjct 20419 CAGCGTCTTATCTTCGCCGGCAAACAACTGGAGGACGGACGCACCCTGTCCGACTACAAC 20478
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||| | || ||||| | ||| | || ||||| ||
Sbjct 20479 ATCCAGAAGGAGTCGACCCTCCACTTGGTCCTCCGTCTCCGCGGTGGAAT 20528
Score = 154 bits (170), Expect = 1e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || || || |||||| | || || | ||||| || || ||
Sbjct 20527 ATGCAGATCTTTGTCAAGACACTTACTGGCAAGACCATCACCTTGGAAGTTGAGCCATCA 20586
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || || || ||||| || ||||| || || |||||
Sbjct 20587 GACACCATTGAAAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGATCAG 20646
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| || || | ||||||||||||| |||| ||| | ||| | ||||||||||||
Sbjct 20647 CAGCGATTGATCTTCGCCGGCAAACAACTGGAGGACGGACGCACCCTGTCCGATTACAAC 20706
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| ||||| || ||||||||| | ||| |||| ||||| ||
Sbjct 20707 ATCCAGAAGGAATCGACTTTGCATTTGGTTCTCCGTCTGCGTGGTGGTAT 20756
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||| |||||||||| | || ||||||||||| || || ||
Sbjct 19615 ATGCAGATCTTTGTCAAGACTTTGACCGGCAAAACCATCACTCTTGAAGTTGAGCCTTCT 19674
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || |||| || || || || || ||||| || || || || || |||||
Sbjct 19675 GATACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCAG 19734
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | |||||| || || |||| || || || | || |||||||||
Sbjct 19735 CAGCGTCTCATTTTCGCCGGAAAGCAGCTGGAGGATGGTCGCACTTTGTCTGATTACAAC 19794
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| ||| | || ||||| | ||| | || ||||| ||
Sbjct 19795 ATCCAGAAGGAGTCCACCCTTCACTTGGTGCTTCGTCTACGCGGTGGAAT 19844
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||| |||||||||| | || ||||||||||| || || ||
Sbjct 19843 ATGCAGATCTTTGTCAAGACTTTGACCGGCAAAACCATCACTCTTGAAGTTGAGCCTTCT 19902
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || |||| || || || || || ||||| || || || || || |||||
Sbjct 19903 GATACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCAG 19962
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | |||||| || || |||| || || || | || |||||||||
Sbjct 19963 CAGCGTCTCATTTTCGCCGGAAAGCAGCTGGAGGATGGTCGCACTTTGTCTGATTACAAC 20022
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| ||| | || ||||| | ||| | || ||||| ||
Sbjct 20023 ATCCAGAAGGAGTCCACCCTTCACTTGGTGCTTCGTCTACGCGGTGGAAT 20072
Score = 118 bits (130), Expect = 9e-22
Identities = 168/237 (71%), Gaps = 7/237 (3%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG--- 27044
|||||||| || ||||| ||| ||||||| ||| | || |||||||| ||||| ||
Sbjct 20834 ATGCAGATTTTCGTAAAGACTTTGACCGGAAAGACAATCACTCTTGAGGTGGAGCCAAGA 20893
Query 27045 ----TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACC 27100
|| ||| | ||||| | || || ||||| || ||||| || || || || ||
Sbjct 20894 GCCTTCGGACACTATTGAAAACGTAAAGGCGAAAATCCAGGACAAGGAGGGAATCCCCCC 20953
Query 27101 CGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGA 27160
||||| |||||| | || | |||||| || || |||| || || || | || ||
Sbjct 20954 AGATCAGCAGCGTCTCATTTTCGCCGGAAAGCAGCTGGAGGATGGTCGCACTTTGTCTGA 21013
Query 27161 TTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||||||| || |||||||| ||| | || ||||| | ||| | || ||||| ||
Sbjct 21014 TTACAACATCCAGAAGGAGTCCACCCTTCACTTGGTGCTTCGTCTACGCGGTGGAAT 21070
>seq4812
Length=908733
Score = 163 bits (180), Expect = 2e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || |||||||| || |||||| | || || || || ||||| || ||
Sbjct 620285 ATGCAGATCTTCGTCAAAACTCTTACTGGCAAGACCATCACCCTGGAGGTGGAGCCTTCA 620226
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | |||||| || || |||||||| || || || || || |||||
Sbjct 620225 GACACCATTGAAAACGTCAAAGCCAAGATCCAAGACAAGGAGGGTATTCCCCCAGATCAG 620166
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | |||||| || || | || || || || | ||||||||||||
Sbjct 620165 CAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACTTTGTCCGATTACAAC 620106
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||||||||| ||||||||| | ||| |||| ||||| ||
Sbjct 620105 ATTCAGAAGGAGTCGACCTTGCATTTGGTTCTCCGTCTGCGTGGTGGTAT 620056
Score = 145 bits (160), Expect = 7e-30
Identities = 161/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27003 AAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATG 27062
|||||||| || |||||| | || || || || ||||| || || ||| | ||||| |
Sbjct 620498 AAAACTCTTACTGGCAAGACCATCACCCTGGAGGTGGAGCCTTCGGACACCATTGAAAAC 620439
Query 27063 GTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATAC 27122
||||| || || |||||||| || || || || || ||||| |||||| | || | |
Sbjct 620438 GTCAAGGCCAAGATCCAAGACAAGGAGGGTATTCCCCCAGATCAGCAGCGTCTTATCTTC 620379
Query 27123 GCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCG 27182
|||||||||||| |||| ||| | ||| | ||||| |||||||| || |||||||||
Sbjct 620378 GCCGGCAAACAACTGGAGGACGGACGCACCCTGTCCGACTACAACATCCAGAAGGAGTCG 620319
Query 27183 ACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| | || ||||| | ||| |||| ||||| ||
Sbjct 620318 ACCCTCCACTTGGTACTCCGTCTGCGCGGTGGAAT 620284
Score = 123 bits (136), Expect = 2e-23
Identities = 146/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||| ||||||| ||| | |||||||| ||||| || || ||
Sbjct 620057 ATGCAAATCTTCGTGAAGACTTTGACCGGAAAGACCATTACTCTGGAAGTCGAGCCTTCT 619998
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | ||||| || || |||||||| || || || || || || ||
Sbjct 619997 GATACCATTGAAAACGTCAAGGCCAAGATCCAAGACAAGGAGGGAATTCCCCCAGACCAG 619938
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||||||| ||| |||| ||| | ||| | || || ||||||
Sbjct 619937 CAGCGTCTCATCTTCGCCGGCAAGCAACTGGAGGACGGACGCACCCTGTCTGACTACAAC 619878
Query 27168 ATTCAAAAGGAGTCGACC 27185
|| || ||||||||||||
Sbjct 619877 ATCCAGAAGGAGTCGACC 619860
Score = 93.3 bits (102), Expect = 4e-14
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| || || ||||| || || || || || ||||||||||| || || | |||||| ||
Sbjct 620837 AAGATCCAGGACAAGGAGGGAATCCCCCCAGATCAACAGCGATTGATCTTCGCCGGAAAG 620778
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
|| | || ||| || || | || ||||||||||| || |||||||||||| | ||
Sbjct 620777 CAGCTTGAGGACGGTCGCACTTTGTCTGATTACAACATCCAGAAGGAGTCGACCCTCCAC 620718
Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| | ||| |||| ||||| ||
Sbjct 620717 TTGGTACTCCGTCTGCGCGGTGGAAT 620692
>seq4563
Length=14502029
Score = 154 bits (170), Expect = 1e-32
Identities = 195/268 (73%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 135474 TGTGGAACGCGGCACAACGGCAGCTTAAGCGAGAAGGCAAAATGCACGGATTTATGCGCA 135533
|||||||| |||| |||| |||||| ||| || ||||||||||| || ||| ||||||
Sbjct 8077024 TGTGGAACTCGGCGCAACTGCAGCTGGTGCGCGAGGGCAAAATGCATGGCTTTCTGCGCA 8076965
Query 135534 TGTATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGAGGCGCTACAACACG 135593
|||| ||||| || ||||| | || ||| | || | |||| ||||| || || | |
Sbjct 8076964 TGTACTGGGCCAAGAAGATTCTCGAGTGGACCGCCACCCCTGAGGAGGCACTGGAATATG 8076905
Query 135594 CAATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAATGGCTACGTAGGTT 135653
| || | | ||||| | ||||| | |||||||||||| | ||||| || || || |
Sbjct 8076904 CGATTCTCCTGAATGACAAGTACAGCCTCGATGGACGCGATCCCAATGGATATGTCGGCT 8076845
Query 135654 GTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGTTTGGCA 135713
| |||||||| ||| | || | ||||| || ||||||||||| | || ||||
Sbjct 8076844 GCATGTGGTCCATTGGGGGAATCCACGACATGGGCTGGAAGGAGCGGGCCATTTTCGGCA 8076785
Query 135714 AGATTCGCTATATGAACTATGACGGTTG 135741
|| |||| || ||||||||| | || ||
Sbjct 8076784 AGGTTCGATACATGAACTATCAGGGGTG 8076757
>seq1
Length=22559587
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || || |||||| | || |||||||| || ||||| ||
Sbjct 20155321 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAACCTTCG 20155380
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | |||||| || ||||| ||||||||||| || || || |||||
Sbjct 20155381 GATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAG 20155440
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| ||||| || ||||||| | ||| | || || || |||
Sbjct 20155441 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTATAAC 20155500
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| |||||||| || || || ||||| |||| |||| |||||
Sbjct 20155501 ATTCAGAAGGAGTCCACTTTGCACTTGGTGCTGCGCCTGCGTGGTGG 20155547
Score = 125 bits (138), Expect = 6e-24
Identities = 167/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045
||||||| || || || ||||| || ||||||||| | || || | || ||||| || |
Sbjct 1137173 CCATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCTT 1137114
Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105
| ||| | || |||| || || || || || ||||| || || || || || ||||
Sbjct 1137113 CGGACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGATC 1137054
Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165
| |||||| | || | ||||||||| || |||| ||| | ||| | ||||| ||||
Sbjct 1137053 AGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGAACCCTGTCCGACTACA 1136994
Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||| || |||||||||||| | || |||| | || |||| ||||| ||
Sbjct 1136993 ACATCCAGAAGGAGTCGACCCTCCACCTGGTGCTCCGCCTGCGCGGTGGTAT 1136942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434871211353600
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