Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1 181 2e-40 seq3325 154 3e-32 seq2 136 9e-27 seq4812 134 3e-26 >seq1 Length=22559587 Score = 181 bits (200), Expect = 2e-40 Identities = 171/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| | ||||||||| || || |||||||| || | ||||| | |||||| Sbjct 20155532 AGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATCT 20155473 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| || || || || || ||||||| |||||| |||||| Sbjct 20155472 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCC 20155413 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||| || |||||||| || || || ||| ||||| |||||||| ||| Sbjct 20155412 TGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACCTCAAGAGTGATGGTC 20155353 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATG 211120 || |||||||| ||||| || || | |||||| || || Sbjct 20155352 TTGCCCGTGAGGGTCTTCACGAAGATCTGCATCTTGTG 20155315 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || || | ||||| | || || Sbjct 1136960 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTCC 1137019 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| || || || || || || || | ||| ||||||||| Sbjct 1137020 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCC 1137079 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || ||||||||||| || || ||||| | ||||| ||| Sbjct 1137080 TGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCACCTCCAAGGTGATGGTC 1137139 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || || || | ||||| Sbjct 1137140 TTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 1137171 >seq3325 Length=21082 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| |||||||| || |||||||| ||||| | | || | ||||| Sbjct 19826 AGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTGCGACCATCC 19767 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || ||||| || || || || || || || || | ||| ||||||||| Sbjct 19766 TCCAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCC 19707 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || |||||||| ||||| ||||| || |||||||| || Sbjct 19706 TGGATCTTGGCCTTCACATTCTCGATGGTATCAGAAGGCTCAACTTCAAGAGTGATGGTT 19647 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || | |||||| ||||| | ||||||| Sbjct 19646 TTGCCGGTCAAAGTCTTGACAAAGATCTGCATT 19614 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| |||||||| || |||||||| ||||| | | || | ||||| Sbjct 20054 AGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTGCGACCATCC 19995 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || ||||| || || || || || || || || | ||| ||||||||| Sbjct 19994 TCCAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCC 19935 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || |||||||| ||||| ||||| || |||||||| || Sbjct 19934 TGGATCTTGGCCTTCACATTCTCGATGGTATCAGAAGGCTCAACTTCAAGAGTGATGGTT 19875 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || | |||||| ||||| | ||||||| Sbjct 19874 TTGCCGGTCAAAGTCTTGACAAAGATCTGCATT 19842 Score = 145 bits (160), Expect = 2e-29 Identities = 164/219 (75%), Gaps = 7/219 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| |||||||| || |||||||| ||||| | | || | ||||| Sbjct 21052 AGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTGCGACCATCC 20993 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || ||||| || || || || || || || || | ||| ||||||||| Sbjct 20992 TCCAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCC 20933 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGA--GCT-----TTCAACCTCGAGAGT 211075 ||||| || || |||||||| || ||||| || ||| || ||||| ||||| Sbjct 20932 TGGATTTTCGCCTTTACGTTTTCAATAGTGTCCGAAGGCTCTTGGCTCCACCTCAAGAGT 20873 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| |||||||| || | ||||||||| || | |||||| Sbjct 20872 GATTGTCTTTCCGGTCAAAGTCTTTACGAAAATCTGCAT 20834 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || || ||||| || |||||||| || || | ||||| | ||| || Sbjct 20510 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCC 20451 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| || ||||| ||||||||||| || || || || || || | || ||||||||| Sbjct 20450 TCCAGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGGATGCCCTCCTTGTCC 20391 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || |||||||| || ||||| || || || || |||||||| ||| Sbjct 20390 TGGATTTTAGCCTTTACGTTTTCAATAGTGTCCGAAGGCTCTACTTCAAGAGTGATGGTC 20331 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || | |||||| || || | |||||| Sbjct 20330 TTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 20299 Score = 136 bits (150), Expect = 9e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || || ||||| || |||||||| || || | ||||| | ||| || Sbjct 19598 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCC 19539 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| || ||||| ||||||||||| || || || || || || | || ||||| ||| Sbjct 19538 TCCAGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGGATGCCCTCCTTATCC 19479 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || ||||| || || || || || ||| || ||||| | ||| || ||| Sbjct 19478 TGGATTTTGGCCTTCACATTCTCAATCGTATCGGAGGGCTCCACCTCCAAAGTAATGGTC 19419 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || | ||||| ||||| | ||||||||| Sbjct 19418 TTTCCAGTCAAGGTCTTCACAAAGATCTGCATTTT 19384 Score = 134 bits (148), Expect = 3e-26 Identities = 149/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||| || || || |||||||| ||||| | ||||| | ||| || ||||| || ||||| Sbjct 20724 AGTCGATTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCCTCCAGTTGTTTGCC 20665 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 |||||||| | || || || || || || | || ||||||||||||||||| || Sbjct 20664 GGCGAAGATCAATCGCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTT 20605 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 ||| ||||| |||||||| || ||||| || | ||||| ||||| || || || || Sbjct 20604 CACATTTTCAATGGTGTCTGATGGCTCAACTTCCAAGGTGATGGTCTTGCCAGTAAGTGT 20545 Query 211097 CTTTACAAACACCTGCATT 211115 ||| ||||| | ||||||| Sbjct 20544 CTTGACAAAGATCTGCATT 20526 >seq2 Length=2985096 Score = 136 bits (150), Expect = 9e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | || || | ||| || |||||||| || |||||||| || || | | Sbjct 123963 TCCACGGAGACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAA 123904 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | |||||| |||| |||||| || |||||||| || || || ||||| || |||| Sbjct 123903 AGTGCGTCCATCCTCCAACTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAAT 123844 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 || ||||||||||||||||| || || || |||||||| || || |||||||| Sbjct 123843 GCCCTCCTTGTCCTGGATCTTGGCCTTAACATTCTCGATGGTATCGGAAGGCTCAACCTC 123784 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 | |||||| ||||| || || || || || || || | ||||| || Sbjct 123783 CAAAGTGATGGTCTTGCCAGTCAGGGTTTTCACGAAAATTTGCATGTT 123736 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | || | ||| ||||| || ||||| || || || | | || | ||| || Sbjct 124178 AGGACCAAATGCAAAGTAGACTCCTTCTGGATATTGTAGTCGGACAAAGTGCGTCCGTCC 124119 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||| || |||||||| | || || ||||| || |||| || ||||||||| Sbjct 124118 TCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 124059 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| |||||||| || || |||||||| | |||||| ||| Sbjct 124058 TGGATCTTGGCCTTCACGTTCTCGATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTC 123999 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 123998 TTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 123967 >seq4812 Length=908733 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || |||||||| || || | ||||| | ||| || Sbjct 620302 AGTACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCC 620361 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| || ||||| ||||||||||| || || || || || |||| || |||||||| Sbjct 620362 TCCAGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTCT 620421 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || |||||||| |||||||| || || ||||| || ||||| ||| Sbjct 620422 TGGATCTTGGCCTTGACGTTTTCAATGGTGTCCGAAGGCTCCACCTCCAGGGTGATGGTC 620481 Query 211083 TTTCCCGTGAGAGTCTT 211099 || || || ||||| || Sbjct 620482 TTGCCAGTAAGAGTTTT 620498 Score = 131 bits (144), Expect = 4e-25 Identities = 146/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 210921 GACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCG 210980 ||||| || |||||||||||||| | | || | || || || |||||||| || ||| Sbjct 620500 GACTCCTTCTGGATGTTATAATCGGACAAAGTGCGACCGTCCTCAAGCTGCTTTCCGGCG 620559 Query 210981 AAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACG 211040 |||||||| || || || || || |||| || |||||||| ||||| || || ||| Sbjct 620560 AAGATAAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTGGATTTTGGCCTTTACG 620619 Query 211041 TTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTT 211100 ||||| |||||||| || || ||||| || ||||| ||||| || || ||||| || Sbjct 620620 TTTTCAATGGTGTCCGAAGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTAAGAGTTTTG 620679 Query 211101 ACAAACACCTGCATT 211115 || || | ||||||| Sbjct 620680 ACGAAGATCTGCATT 620694 Score = 87.8 bits (96), Expect = 4e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || |||||||| ||||| | | || | || || Sbjct 620710 AGTACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGACAAAGTGCGACCGTCC 620769 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| | || ||||| || || || | ||| ||||||||| Sbjct 620770 TCAAGCTGCTTTCCGGCGAAGATCAATCGCTGTTGATCTGGGGGGATTCCCTCCTTGTCC 620829 Query 211023 TGGATCTT 211030 |||||||| Sbjct 620830 TGGATCTT 620837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159023087808200