Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1 500 1e-136 >seq1 Length=22559587 Score = 500 bits (554), Expect = 1e-136 Identities = 1250/1884 (66%), Gaps = 26/1884 (1%) Strand=Plus/Plus Query 76769 ATTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACAT 76828 |||||| || | || |||||||| | | || || ||||| || || || ||||| Sbjct 20041581 ATTCTTGTCTACAGTGAACTGAATAGCGTTTGCAGCTGGCTTTGTGCGCAGGTAATACAT 20041640 Query 76829 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACT 76888 |||||||||||||| |||| || || || ||| || ||||| || | Sbjct 20041641 TCCAGTTTTTAGACCAGCTTTCCAGGAATAAAAGTGTATGGAAGTAAGTTTTCCGTAGTT 20041700 Query 76889 AGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 76948 || || || | |||||| || | ||||||||| ||||| || || || |||| ||| || Sbjct 20041701 TGGCTCTGCCACATGAATGTTGAACGACTGACTCTGATCTATAAACGCACCTCGATCTGC 20041760 Query 76949 CGCCATTTTTATAATGGTCTTT--TGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTG 77006 ||||| || ||| ||| |||| |||| |||||||| | ||||||| | | | | Sbjct 20041761 GGCCATCTTAATAGTGGACTTTACTGAG--ATTTCCCACACAGTTTTGTACAGATCGC-G 20041817 Query 77007 ATATCATCTGG---AAGGTTTG--TATTTTGAATGGAACCACCATCTG-ATATAATTGTA 77060 | | | ||||| | || | ||||||| || || || || ||| | || ||| Sbjct 20041818 A-ACCTTCTGGGGGATGGCCTCAATATTTTGGATTGAGCC-CCTGCTGGAAATGATTTGG 20041875 Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTA 77120 ||||| ||||| || | |||||| | | ||| |||| | || | | |||| | ||| Sbjct 20041876 TTCTTCATATCGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTA 20041935 Query 77121 ACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 77180 || | ||| ||||||||||||| |||| | || |||||||| | || || || || Sbjct 20041936 ACCACTTGGAATTCTCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTAAGGCTCG 20041995 Query 77181 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAAT 77240 | ||||| ||||| |||| ||||||||||||||||||||| |||||||| || ||||| Sbjct 20041996 AATGATTCGTTGTTACCCATAATTTGAGCAGTAGAAGCAGTGGGCATAGGAGCAACCAAC 20042055 Query 77241 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 77300 | || | || ||| || | |||| || || || | | ||| |||||||| Sbjct 20042056 AGGGAGTTCCGGACACCGTGCTTCTTGATGGACTCCTTCAGTTTCTGCCAGTCCCAAAGG 20042115 Query 77301 TCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCA 77360 | | || | ||||| | ||||| || |||||||| || || | ||| Sbjct 20042116 TTCGTTGGCTCTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCC 20042175 Query 77361 TTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCG 77420 | ||| |||||||| || ||||| | | || ||||||||||| |||||||| || ||| Sbjct 20042176 TCATAGGTTTCATATGGACCTTCGATCTGGGCCAGTTCACAACTGGCTTCCAAAGCGCCG 20042235 Query 77421 TAATAAATTGTTTCGAAAATCTTCTTATT-GAGATCTTGTGCTTCAATACTATCAAACGG 77479 || || || ||||||||||||| || ||| ||| | |||||| ||| ||| | || Sbjct 20042236 TAGTAGATAGTTTCGAAAATCTGCTGATTCAAGAGGCCG-GCTTCATCACTTTCATAGGG 20042294 Query 77480 ATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATG 77539 | | | ||||| ||||| || || |||||||| || || || || | || | ||| Sbjct 20042295 GAACCGCATGAGAATCAAGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGATG 20042354 Query 77540 TCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATT 77599 ||| |||||| | || || ||||| | || || | ||||| || || || || || Sbjct 20042355 CCTCAAATTGGATTTCTTGGCCTCTGGCAGGGGGTAGAAGTTAATATCGATTATCTTGTT 20042414 Query 77600 GAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATC--AAATCTTC-C 77656 ||||| | ||| || || ||||| ||||| ||||| | ||||| | Sbjct 20042415 AAGATTCTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTTGAAATCGTATGTCTTCTC 20042474 Query 77657 ATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGC 77716 | ||||||||||| | || || ||||| | || |||||||| | ||||| | Sbjct 20042475 GGGAGTGACAAACATGTTGAGGGCGATGGATGCCAAGTTGCAAACTGCAATCTCATCCGG 20042534 Query 77717 GTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTG 77776 || ||| | || || || || || | ||| ||||| ||||| ||||| | ||| || Sbjct 20042535 AGCGGAATACTCTACGATTTCTGTGCACAAATTGCTACACTTGATGGTGCCGACATTCTG 20042594 Query 77777 TTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAAT 77836 ||||||||||| | ||||| | |||||| | | || | || | || ||||| | Sbjct 20042595 CTGGTTGCTCTTCCTGTTGCAGGCATCCTTAAACAACATGTAGGGGTTTCCAGTTTCGAC 20042654 Query 77837 CTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATCGCCT 77896 ||||| ||| ||||| | ||| | | | ||| || | | ||| || | Sbjct 20042655 CTGTGCTTCAATAATGGCAAACCACAGGGATTGAGCCTTAACAGTTCTGTTGGCACGACC 20042714 Query 77897 CTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCC 77956 |||| ||||||| ||| | | ||| |||||||| ||||| ||||| | | || Sbjct 20042715 CTCTTGCTCATATTTCTCATACAACTTTTCGAATTCATCGCCCCACACATCGTGAAGCCC 20042774 Query 77957 AGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAA 78016 |||||||| || ||||||||| | ||||| || |||| ||| || || |||||||| Sbjct 20042775 AGGGCATTTATGTGGGCACATTAGCGACCAATCTCCATTGGCCTCGACGCGCTTCATAAA 20042834 Query 78017 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGT 78076 |||||| |||||||| || || ||| ||||| |||| | || ||| || || || || Sbjct 20042835 GAGATCGGGTATCCACAGGGCGTAAAACAGATCGCGGGCCCGATTTTCCTCCTTGCCGGT 20042894 Query 78077 ATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGC 78136 || || ||||| || || ||||| | | ||| || ||||| || || || || || || Sbjct 20042895 GTTTTTCTTAAGTTCCAGGAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGC 20042954 Query 78137 CATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAAC 78196 | | || || || || |||||| ||||| | ||| | || || || | || Sbjct 20042955 AAAGGCACCGGGACGCTTGCCACCTCCTTGATCCACATAACGCGCCACATTGTTGAAGAC 20043014 Query 78197 TCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACT 78256 |||||||| |||| | || || ||||| ||||| ||||| |||| | | || | Sbjct 20043015 CCTCAACATGGGAACCAAGCCATTGGATGTGCCATTCGTTCCGCAAATCGAGGTGCCCTT 20043074 Query 78257 TGCGCGAATATTACTAATGGA----TATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312 ||| || || |||||| | || || || || ||| || || || | | Sbjct 20043075 TGCCCGGAT----GCAATGGACGTTAAGTCCAATGCCGCCGGCCGATTTCGAGATCAAGG 20043130 Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAA 78372 | || ||| || | | | || ||||| ||| ||| || ||||| | | || | Sbjct 20043131 CACACTGTTCCACGGACTTAAAAATGCCCTCGATAGAGTCGGCCGTCATGGTCAAGAGGA 20043190 Query 78373 AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCG 78432 | || |||| || | || || | || ||| | ||| || || ||||||| Sbjct 20043191 AGCAAGACGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGTGTTGGCGACGCATGCG 20043250 Query 78433 TAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGAT 78492 | || || || || | ||||| || ||||| | || | ||||| ||| || Sbjct 20043251 TGAAGTATCGCTCCGACAAGAGATTATAAGTTTCCACGGCCGCATCTATATCCTCCCCAT 20043310 Query 78493 GAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTA 78552 | ||||| | ||| || |||||||||||||| || || | || | | || ||| Sbjct 20043311 GGATTCCGATCGCCACGCGCATCAACATATGTTGCGGACGCTCTGCAATTTTTCCGTTTC 20043370 Query 78553 TTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 78612 | |||| || || || ||| | || ||||| ||||| ||||| || |||||| | Sbjct 20043371 TCTTCAGCAGATAGGAACGTTCTAGGGTCTTAAACCCAAAGTAGTTATACCCAAAGTCGC 20043430 Query 78613 TCTCGTAAATAATAACAGAATTTA 78636 ||||| || ||| ||| |||| Sbjct 20043431 GGTCGTAGATTATAGAAGAGTTTA 20043454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694593428435200