Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1 500 1e-136
>seq1
Length=22559587
Score = 500 bits (554), Expect = 1e-136
Identities = 1250/1884 (66%), Gaps = 26/1884 (1%)
Strand=Plus/Plus
Query 76769 ATTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACAT 76828
|||||| || | || |||||||| | | || || ||||| || || || |||||
Sbjct 20041581 ATTCTTGTCTACAGTGAACTGAATAGCGTTTGCAGCTGGCTTTGTGCGCAGGTAATACAT 20041640
Query 76829 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACT 76888
|||||||||||||| |||| || || || ||| || ||||| || |
Sbjct 20041641 TCCAGTTTTTAGACCAGCTTTCCAGGAATAAAAGTGTATGGAAGTAAGTTTTCCGTAGTT 20041700
Query 76889 AGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 76948
|| || || | |||||| || | ||||||||| ||||| || || || |||| ||| ||
Sbjct 20041701 TGGCTCTGCCACATGAATGTTGAACGACTGACTCTGATCTATAAACGCACCTCGATCTGC 20041760
Query 76949 CGCCATTTTTATAATGGTCTTT--TGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTG 77006
||||| || ||| ||| |||| |||| |||||||| | ||||||| | | | |
Sbjct 20041761 GGCCATCTTAATAGTGGACTTTACTGAG--ATTTCCCACACAGTTTTGTACAGATCGC-G 20041817
Query 77007 ATATCATCTGG---AAGGTTTG--TATTTTGAATGGAACCACCATCTG-ATATAATTGTA 77060
| | | ||||| | || | ||||||| || || || || ||| | || |||
Sbjct 20041818 A-ACCTTCTGGGGGATGGCCTCAATATTTTGGATTGAGCC-CCTGCTGGAAATGATTTGG 20041875
Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTA 77120
||||| ||||| || | |||||| | | ||| |||| | || | | |||| | |||
Sbjct 20041876 TTCTTCATATCGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTA 20041935
Query 77121 ACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 77180
|| | ||| ||||||||||||| |||| | || |||||||| | || || || ||
Sbjct 20041936 ACCACTTGGAATTCTCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTAAGGCTCG 20041995
Query 77181 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAAT 77240
| ||||| ||||| |||| ||||||||||||||||||||| |||||||| || |||||
Sbjct 20041996 AATGATTCGTTGTTACCCATAATTTGAGCAGTAGAAGCAGTGGGCATAGGAGCAACCAAC 20042055
Query 77241 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 77300
| || | || ||| || | |||| || || || | | ||| ||||||||
Sbjct 20042056 AGGGAGTTCCGGACACCGTGCTTCTTGATGGACTCCTTCAGTTTCTGCCAGTCCCAAAGG 20042115
Query 77301 TCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCA 77360
| | || | ||||| | ||||| || |||||||| || || | |||
Sbjct 20042116 TTCGTTGGCTCTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCC 20042175
Query 77361 TTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCG 77420
| ||| |||||||| || ||||| | | || ||||||||||| |||||||| || |||
Sbjct 20042176 TCATAGGTTTCATATGGACCTTCGATCTGGGCCAGTTCACAACTGGCTTCCAAAGCGCCG 20042235
Query 77421 TAATAAATTGTTTCGAAAATCTTCTTATT-GAGATCTTGTGCTTCAATACTATCAAACGG 77479
|| || || ||||||||||||| || ||| ||| | |||||| ||| ||| | ||
Sbjct 20042236 TAGTAGATAGTTTCGAAAATCTGCTGATTCAAGAGGCCG-GCTTCATCACTTTCATAGGG 20042294
Query 77480 ATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATG 77539
| | | ||||| ||||| || || |||||||| || || || || | || | |||
Sbjct 20042295 GAACCGCATGAGAATCAAGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGATG 20042354
Query 77540 TCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATT 77599
||| |||||| | || || ||||| | || || | ||||| || || || || ||
Sbjct 20042355 CCTCAAATTGGATTTCTTGGCCTCTGGCAGGGGGTAGAAGTTAATATCGATTATCTTGTT 20042414
Query 77600 GAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATC--AAATCTTC-C 77656
||||| | ||| || || ||||| ||||| ||||| | ||||| |
Sbjct 20042415 AAGATTCTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTTGAAATCGTATGTCTTCTC 20042474
Query 77657 ATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGC 77716
| ||||||||||| | || || ||||| | || |||||||| | ||||| |
Sbjct 20042475 GGGAGTGACAAACATGTTGAGGGCGATGGATGCCAAGTTGCAAACTGCAATCTCATCCGG 20042534
Query 77717 GTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTG 77776
|| ||| | || || || || || | ||| ||||| ||||| ||||| | ||| ||
Sbjct 20042535 AGCGGAATACTCTACGATTTCTGTGCACAAATTGCTACACTTGATGGTGCCGACATTCTG 20042594
Query 77777 TTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAAT 77836
||||||||||| | ||||| | |||||| | | || | || | || ||||| |
Sbjct 20042595 CTGGTTGCTCTTCCTGTTGCAGGCATCCTTAAACAACATGTAGGGGTTTCCAGTTTCGAC 20042654
Query 77837 CTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATCGCCT 77896
||||| ||| ||||| | ||| | | | ||| || | | ||| || |
Sbjct 20042655 CTGTGCTTCAATAATGGCAAACCACAGGGATTGAGCCTTAACAGTTCTGTTGGCACGACC 20042714
Query 77897 CTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCC 77956
|||| ||||||| ||| | | ||| |||||||| ||||| ||||| | | ||
Sbjct 20042715 CTCTTGCTCATATTTCTCATACAACTTTTCGAATTCATCGCCCCACACATCGTGAAGCCC 20042774
Query 77957 AGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAA 78016
|||||||| || ||||||||| | ||||| || |||| ||| || || ||||||||
Sbjct 20042775 AGGGCATTTATGTGGGCACATTAGCGACCAATCTCCATTGGCCTCGACGCGCTTCATAAA 20042834
Query 78017 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGT 78076
|||||| |||||||| || || ||| ||||| |||| | || ||| || || || ||
Sbjct 20042835 GAGATCGGGTATCCACAGGGCGTAAAACAGATCGCGGGCCCGATTTTCCTCCTTGCCGGT 20042894
Query 78077 ATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGC 78136
|| || ||||| || || ||||| | | ||| || ||||| || || || || || ||
Sbjct 20042895 GTTTTTCTTAAGTTCCAGGAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTAAATGGC 20042954
Query 78137 CATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAAC 78196
| | || || || || |||||| ||||| | ||| | || || || | ||
Sbjct 20042955 AAAGGCACCGGGACGCTTGCCACCTCCTTGATCCACATAACGCGCCACATTGTTGAAGAC 20043014
Query 78197 TCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACT 78256
|||||||| |||| | || || ||||| ||||| ||||| |||| | | || |
Sbjct 20043015 CCTCAACATGGGAACCAAGCCATTGGATGTGCCATTCGTTCCGCAAATCGAGGTGCCCTT 20043074
Query 78257 TGCGCGAATATTACTAATGGA----TATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312
||| || || |||||| | || || || || ||| || || || | |
Sbjct 20043075 TGCCCGGAT----GCAATGGACGTTAAGTCCAATGCCGCCGGCCGATTTCGAGATCAAGG 20043130
Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAA 78372
| || ||| || | | | || ||||| ||| ||| || ||||| | | || |
Sbjct 20043131 CACACTGTTCCACGGACTTAAAAATGCCCTCGATAGAGTCGGCCGTCATGGTCAAGAGGA 20043190
Query 78373 AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCG 78432
| || |||| || | || || | || ||| | ||| || || |||||||
Sbjct 20043191 AGCAAGACGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGTGTTGGCGACGCATGCG 20043250
Query 78433 TAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGAT 78492
| || || || || | ||||| || ||||| | || | ||||| ||| ||
Sbjct 20043251 TGAAGTATCGCTCCGACAAGAGATTATAAGTTTCCACGGCCGCATCTATATCCTCCCCAT 20043310
Query 78493 GAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTA 78552
| ||||| | ||| || |||||||||||||| || || | || | | || |||
Sbjct 20043311 GGATTCCGATCGCCACGCGCATCAACATATGTTGCGGACGCTCTGCAATTTTTCCGTTTC 20043370
Query 78553 TTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 78612
| |||| || || || ||| | || ||||| ||||| ||||| || |||||| |
Sbjct 20043371 TCTTCAGCAGATAGGAACGTTCTAGGGTCTTAAACCCAAAGTAGTTATACCCAAAGTCGC 20043430
Query 78613 TCTCGTAAATAATAACAGAATTTA 78636
||||| || ||| ||| ||||
Sbjct 20043431 GGTCGTAGATTATAGAAGAGTTTA 20043454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694593428435200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |