Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1 508 8e-139 >seq1 Length=22559587 Score = 508 bits (562), Expect = 8e-139 Identities = 1249/1880 (66%), Gaps = 38/1880 (2%) Strand=Plus/Plus Query 75364 ATTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACAT 75423 |||||| || | ||||||||||| | | ||||| ||||| || || || ||||| Sbjct 20041581 ATTCTTGTCTACAGTGAACTGAATAGCGTTTGCAGCTGGCTTTGTGCGCAGGTAATACAT 20041640 Query 75424 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACT 75483 |||||||||||||| |||| || || || ||| || ||||| || | Sbjct 20041641 TCCAGTTTTTAGACCAGCTTTCCAGGAATAAAAGTGTATGGAAGTAAGTTTTCCGTAGTT 20041700 Query 75484 CGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 75543 || || || | |||||| || | ||||||||| ||||| || || || |||| ||| || Sbjct 20041701 TGGCTCTGCCACATGAATGTTGAACGACTGACTCTGATCTATAAACGCACCTCGATCTGC 20041760 Query 75544 CGCCATTTTTATAATGGTCTTT--TGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTG 75601 ||||| || ||| ||| |||| |||| |||||||| | ||||||| | | | | Sbjct 20041761 GGCCATCTTAATAGTGGACTTTACTGAG--ATTTCCCACACAGTTTTGTACAGATCGC-G 20041817 Query 75602 ATATCATCTGGAAGATTTG-----TATTTTGAATGGATCCGCCATCAGATATAATTGTAT 75656 | | | ||||| ||| ||||||| || || || | || || ||| | Sbjct 20041818 A-ACCTTCTGGGGGATGGCCTCAATATTTTGGATTGAGCCCCTGCTGGAAATGATTTGGT 20041876 Query 75657 TCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAA 75716 |||| || || || | |||||| | ||| |||| | || | | |||| | |||| Sbjct 20041877 TCTTCATATCGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTAA 20041936 Query 75717 CAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCA 75776 | | ||| ||||||||||||| |||| | || |||||||| | || || || || | Sbjct 20041937 CCACTTGGAATTCTCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTAAGGCTCGA 20041996 Query 75777 CAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATA 75836 ||||| ||||| |||| |||||||||||| |||||||| |||||||| || ||||| | Sbjct 20041997 ATGATTCGTTGTTACCCATAATTTGAGCAGTAGAAGCAGTGGGCATAGGAGCAACCAACA 20042056 Query 75837 AACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGAT 75896 || | || ||| || | |||| || || || | | ||| |||||||| | Sbjct 20042057 GGGAGTTCCGGACACCGTGCTTCTTGATGGACTCCTTCAGTTTCTGCCAGTCCCAAAGGT 20042116 Query 75897 CTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCAT 75956 | ||| | ||||| | ||||| || |||||||| ||||| | ||| | Sbjct 20042117 TCGTTGGCTCTTTGTCCCACATGTCGTACTGCAGAATTCCTTTGCTCACGGGGCTTCCCT 20042176 Query 75957 TATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGT 76016 ||| ||||| || | || || | | || ||||| ||||| || || || || |||| Sbjct 20042177 CATAGGTTTCATATGGACCTTCGATCTGGGCCAGTTCACAACTGGCTTCCAAAGCGCCGT 20042236 Query 76017 AATAAATTGTTTCGAAAATCTTCTTATT-AAGATCTTGCGCTTCAAGACTATCAAAAGGA 76075 | || || ||||||||||||| || ||| |||| | |||||| ||| ||| | || Sbjct 20042237 AGTAGATAGTTTCGAAAATCTGCTGATTCAAGAGGCCG-GCTTCATCACTTTCATAGGGG 20042295 Query 76076 TAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGT 76135 | | | ||||| || || || || | |||||| || || || || | || | ||| Sbjct 20042296 AACCGCATGAGAATCAAGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGATGC 20042355 Query 76136 CTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTG 76195 ||| |||||| | | || ||||| | ||||| | |||||||| || || || || Sbjct 20042356 CTCAAATTGGATTTCTTGGCCTCTGGCAGGGGGTAGAAGTTAATATCGATTATCTTGTTA 20042415 Query 76196 AGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCT 76255 ||||| || ||| || || ||||| ||||| ||||| || | | ||| Sbjct 20042416 AGATTCTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTTGAAATCGTATGT--CTTCT 20042473 Query 76256 -----ATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAG 76310 | |||||||| || || || || ||||| | || ||||| || | ||||| | Sbjct 20042474 CGGGAGTGACAAACATGTTGAGGGCGATGGATGCCAAGTTGCAAACTGCAATCTCATCCG 20042533 Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTT 76370 | || ||| | || || || ||||| | ||| ||||||||||| || || | ||| | Sbjct 20042534 GAGCGGAATACTCTACGATTTCTGTGCACAAATTGCTACACTTGATGGTGCCGACATTCT 20042593 Query 76371 GTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACA--AACGGAGTTCCAGTTTC 76428 | ||||||||||| |||| || | |||| |||| |||| | || |||||||||| Sbjct 20042594 GCTGGTTGCTCTTCCTGTTGCAGGCATCCT--TAAACAACATGTAGGGGTTTCCAGTTTC 20042651 Query 76429 AATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTG-TATC 76487 | ||||| ||| ||||| | ||| | | | ||| | | | || | || | | Sbjct 20042652 GACCTGTGCTTCAATAATGGCAAACCACAGGGATTGAGCCT---TAACAGTTCTGTTGGC 20042708 Query 76488 GCTTCTCTCTT--TCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATC 76545 | | ||||| ||||||| ||| ||| ||| |||||||| ||||| ||||| | Sbjct 20042709 ACGACCCTCTTGCTCATATTTCTCATACAACTTTTCGAATTCATCGCCCCACACATCGTG 20042768 Query 76546 CAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTT 76605 | ||||| |||| || || ||||| | ||||| || |||| ||| || || || Sbjct 20042769 AAGCCCAGGGCATTTATGTGGGCACATTAGCGACCAATCTCCATTGGCCTCGACGCGCTT 20042828 Query 76606 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATT 76665 |||||||||||| |||||||| || || ||| ||||| |||| | | ||| || || Sbjct 20042829 CATAAAGAGATCGGGTATCCACAGGGCGTAAAACAGATCGCGGGCCCGATTTTCCTCCTT 20042888 Query 76666 TCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATA 76725 || || || || ||||| || |||||||| | | ||| || ||||| || || || || Sbjct 20042889 GCCGGTGTTTTTCTTAAGTTCCAGGAACTCAAAGACATCCGAGTGCCAGGGCTCCAGGTA 20042948 Query 76726 TATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATT 76785 || || | |||| || || || |||||| ||||| | ||| | || || || Sbjct 20042949 AATGGCAAAGGCACCGGGACGCTTGCCACCTCCTTGATCCACATAACGCGCCACATTGTT 20043008 Query 76786 ATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACT 76845 | || |||||||| |||| | ||| || ||||| ||||| ||||| |||| | | Sbjct 20043009 GAAGACCCTCAACATGGGAACCAAGCCATTGGATGTGCCATTCGTTCCGCAAATCGAGGT 20043068 Query 76846 TCCACATGCACGAATATTACTAATAGA----TAGGCCTATTCCTCCTGCCATTTTAGAGA 76901 || ||| || || ||| || || || || || || ||| ||| |||| Sbjct 20043069 GCCCTTTGCCCGGAT----GCAATGGACGTTAAGTCCAATGCCGCCGGCCGATTTCGAGA 20043124 Query 76902 TTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAA 76961 | | ||||| ||| || | | | | |||||||| ||| || || ||||| | | Sbjct 20043125 TCAAGGCACACTGTTCCACGGACTTAAAAATGCCCTCGATAGAGTCGGCCGTCATGGTCA 20043184 Query 76962 GAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATG 77021 || || || |||| || | || || | || ||| | ||| || || | Sbjct 20043185 AGAGGAAGCAAGACGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGTGTTGGCGACG 20043244 Query 77022 CATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCC 77081 |||| ||||| || || || | ||||| || ||||| | | || ||||||||| Sbjct 20043245 CATGCGTGAAGTATCGCTCCGACAAGAGATTATAAGTTTCCACGGCCGCATCTATATCCT 20043304 Query 77082 ATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTAT 77141 ||| ||||| | || || |||||||||||||| || || || ||| || | || Sbjct 20043305 CCCCATGGATTCCGATCGCCACGCGCATCAACATATGTTGCGGACGCTCTGCAATTTTTC 20043364 Query 77142 TATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 77201 ||| | |||| || || || ||| | || ||||| ||||| ||||| || || Sbjct 20043365 CGTTTCTCTTCAGCAGATAGGAACGTTCTAGGGTCTTAAACCCAAAGTAGTTATACCCAA 20043424 Query 77202 AGTCTCTTTCGTAAATAATA 77221 |||| | ||||| || ||| Sbjct 20043425 AGTCGCGGTCGTAGATTATA 20043444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712857046617600