Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30]
8,680 sequences; 232,923,092 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq3325 132 1e-25
seq4812 123 6e-23
seq1 111 4e-19
seq2 105 2e-17
>seq3325
Length=21082
Score = 132 bits (146), Expect = 1e-25
Identities = 158/211 (75%), Gaps = 5/211 (2%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||| || ||||| || |||||||||||||| | ||||| | ||||| || |
Sbjct 19821 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTGCGACCATCCTCCA 19763
Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
| ||||| |||||||| || || | |||||| || | | |||||| ||||| || ||
Sbjct 19762 GCTGCTTT--CCGGCGAAAATGAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTG 19705
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|| || || ||| |||| | | | || ||| ||| ||||||||||| || |||||
Sbjct 19704 GATCTTGGCCTTCACATTCTCGATGGTATCAGAAGGCTCAACTTCAAGAGTGATGGTTTT 19645
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
||| || | |||||| || |||| |||||||
Sbjct 19644 GCCGGTCAAAGTCTTGACAAAGATCTGCATT 19614
Score = 132 bits (146), Expect = 1e-25
Identities = 158/211 (75%), Gaps = 5/211 (2%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||| || ||||| || |||||||||||||| | ||||| | ||||| || |
Sbjct 20049 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTGCGACCATCCTCCA 19991
Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
| ||||| |||||||| || || | |||||| || | | |||||| ||||| || ||
Sbjct 19990 GCTGCTTT--CCGGCGAAAATGAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTG 19933
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|| || || ||| |||| | | | || ||| ||| ||||||||||| || |||||
Sbjct 19932 GATCTTGGCCTTCACATTCTCGATGGTATCAGAAGGCTCAACTTCAAGAGTGATGGTTTT 19873
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
||| || | |||||| || |||| |||||||
Sbjct 19872 GCCGGTCAAAGTCTTGACAAAGATCTGCATT 19842
Score = 116 bits (128), Expect = 9e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| | || || || ||||| || ||||||||||| |||| | || |
Sbjct 20517 GAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCG 20458
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| || || || ||| |||||||||||||| | |||||| || | | ||| || ||
Sbjct 20457 TCCGTCCTCCAGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGGATGCCCTC 20398
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || ||||| || || | || | |||| ||| |||||||||||||||
Sbjct 20397 CTTGTCCTGGATTTTAGCCTTTACGTTTTCAATAGTGTCCGAAGGCTCTACTTCAAGAGT 20338
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || | |||||| ||||| | ||||||
Sbjct 20337 GATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 20299
Score = 105 bits (116), Expect = 2e-17
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| | || || || ||||| || ||||||||||| |||| | || | || ||
Sbjct 19599 GAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTC 19540
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || ||| |||||||||||||| | |||||| || | | ||| || ||||| ||
Sbjct 19539 CTCCAGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGGATGCCCTCCTTATC 19480
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| ||||| || ||| |||| | | || || ||| || || | |||||| ||
Sbjct 19479 CTGGATTTTGGCCTTCACATTCTCAATCGTATCGGAGGGCTCCACCTCCAAAGTAATGGT 19420
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || | |||||||| |||| |||||||||
Sbjct 19419 CTTTCCAGTCAAGGTCTTCACAAAGATCTGCATTTT 19384
Score = 100 bits (110), Expect = 7e-16
Identities = 155/217 (71%), Gaps = 12/217 (6%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||| || ||||| || |||||||||||||| | ||||| | ||||| || |
Sbjct 21047 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTGCGACCATCCTCCA 20989
Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
| ||||| |||||||| || || | |||||| || | | |||||| ||||| || ||
Sbjct 20988 GCTGCTTT--CCGGCGAAAATGAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTG 20931
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAA--CT-----CTCTACTTCAAGAGTAA 152067
||||| || || | || | |||| ||| || ||| || |||||||| |
Sbjct 20930 GATTTTCGCCTTTACGTTTTCAATAGTGTCCGAAGGCTCTTGGCTCCACCTCAAGAGTGA 20871
Query 152068 TAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || || || || | |||||| ||||| | ||||||
Sbjct 20870 TTGTCTTTCCGGTCAAAGTCTTTACGAAAATCTGCAT 20834
Score = 98.7 bits (108), Expect = 2e-15
Identities = 143/200 (72%), Gaps = 4/200 (2%)
Strand=Plus/Minus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCC 151965
|| ||||| || || ||||||||||||| | || | ||||| || || ||||| |
Sbjct 20267 GTCGACTCCTTCTGAATGTTGTAATCGGACAGGGTGCGACCATCCTCAAGCTGCTTT--C 20210
Query 151966 CGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTT 152025
|||||||||| || | |||||| || | | ||| || ||||| ||||| || || |
Sbjct 20209 CGGCGAAGATGAGACGCTGCTGATCTGGGGGGATGCCCTCCTTGTCTTGGATCTTAGCCT 20150
Query 152026 TGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085
|||| | || | | |||| ||| || || || || || || || ||||| || ||||
Sbjct 20149 TGACGTTTTCAATGGTGTCCGAAGGTTCCACCTCCAGGGTGATGGTCTTGCCAGTAAGAG 20090
Query 152086 TCTTCACGAAGACCTGCATT 152105
| || || |||| |||||||
Sbjct 20089 TTTTGACAAAGATCTGCATT 20070
Score = 98.7 bits (108), Expect = 2e-15
Identities = 150/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || | ||| | ||| || || || |||||||||||||||| | || | || ||
Sbjct 20739 GAGAACCAAATGCAAAGTCGATTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTC 20680
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || ||| ||||||||||| | | |||||| || | | ||| || ||||| ||
Sbjct 20679 CTCCAGTTGTTTGCCGGCGAAGATCAATCGCTGCTGATCTGGGGGGATGCCCTCCTTGTC 20620
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || || ||| | || | | ||||||| ||| ||||| | || || ||
Sbjct 20619 CTGGATCTTGGCCTTCACATTTTCAATGGTGTCTGATGGCTCAACTTCCAAGGTGATGGT 20560
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
||||| || || ||||| || |||| |||||||
Sbjct 20559 CTTGCCAGTAAGTGTCTTGACAAAGATCTGCATT 20526
>seq4812
Length=908733
Score = 123 bits (136), Expect = 6e-23
Identities = 158/216 (73%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || | ||| | || ||||| || || ||||||||||||| ||||| | |||||
Sbjct 620073 GAGAACCAAATGCAAGGTCGACTCCTTCTGAATGTTGTAATCGGACAAAGTGCGACCATC 620132
Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009
|| || ||||| ||||||||||| || | |||||| || | | || || |||||
Sbjct 620133 CTCAAGCTGCTTT--CCGGCGAAGATGAGACGCTGCTGATCTGGGGGAATACCCTCCTTG 620190
Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069
||||| || || |||||| | || | | |||||||| ||| || || || || ||
Sbjct 620191 TCTTGGATCTTGGCTTTGACGTTTTCAATGGTGTCTGAAGGCTCCACCTCCAGGGTGATG 620250
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| ||||| || ||||| || ||||||| |||||||
Sbjct 620251 GTCTTGCCAGTAAGAGTTTTGACGAAGATCTGCATT 620286
Score = 111 bits (122), Expect = 4e-19
Identities = 144/197 (73%), Gaps = 4/197 (2%)
Strand=Plus/Plus
Query 151911 GACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGG 151968
||||| || |||||||| ||||||| ||||| | || || || || ||||| ||||
Sbjct 620500 GACTCCTTCTGGATGTTATAATCGGACAAAGTGCGACCGTCCTCAAGCTGCTTT--CCGG 620557
Query 151969 CGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGA 152028
|||||||||| | |||||| || | | || || ||||| ||||| ||||| || |
Sbjct 620558 CGAAGATAAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTGGATTTTGGCCTTTA 620617
Query 152029 CAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCT 152088
| | || | | |||| ||| ||| || || || || || || ||||| || ||||| |
Sbjct 620618 CGTTTTCAATGGTGTCCGAAGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTAAGAGTTT 620677
Query 152089 TCACGAAGACCTGCATT 152105
| ||||||| |||||||
Sbjct 620678 TGACGAAGATCTGCATT 620694
Score = 104 bits (114), Expect = 5e-17
Identities = 143/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 151905 AGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTC 151964
|| || ||||| || ||||||||||| || | | || | || || || || ||
Sbjct 619858 AGGGTCGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCGTCCTCCAGTTGCTTG 619917
Query 151965 CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGT 152024
||||||||||| || | ||||||||| | | ||||| ||||| ||||| || ||
Sbjct 619918 CCGGCGAAGATGAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCTTGGATCTTGGCC 619977
Query 152025 TTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGA 152084
||||| | || | | | || ||| ||| ||||| |||||||| || || || || | |
Sbjct 619978 TTGACGTTTTCAATGGTATCAGAAGGCTCGACTTCCAGAGTAATGGTCTTTCCGGTCAAA 620037
Query 152085 GTCTTCACGAAGACCTGCAT 152104
||||||||||||| |||||
Sbjct 620038 GTCTTCACGAAGATTTGCAT 620057
Score = 89.7 bits (98), Expect = 1e-12
Identities = 137/194 (71%), Gaps = 1/194 (1%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| || ||||||||||| |||| | || | || || || |
Sbjct 620307 CAAG-TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCA 620365
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| ||| |||||||||||||| | |||||| || | | || || ||||| ||||| |
Sbjct 620366 GTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTGGA 620425
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || ||||| | || | | |||| ||| ||| || || || || || || ||||
Sbjct 620426 TCTTGGCCTTGACGTTTTCAATGGTGTCCGAAGGCTCCACCTCCAGGGTGATGGTCTTGC 620485
Query 152077 CCGTGAGAGTCTTC 152090
| || ||||| |||
Sbjct 620486 CAGTAAGAGTTTTC 620499
>seq1
Length=22559587
Score = 111 bits (122), Expect = 4e-19
Identities = 152/211 (72%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || | ||| ||||| || || ||||| || || | | || | |||||||| |
Sbjct 20155527 CAAG-TGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATCTTCCA 20155469
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || |||||||| || | |||||| || | | |||||||| || || ||||
Sbjct 20155468 GCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGAA 20155409
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || ||||||| | || | | || ||| || || |||||||| || || ||||
Sbjct 20155408 TCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACCTCAAGAGTGATGGTCTTGC 20155349
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
||||||| ||||||||||||| |||||| ||
Sbjct 20155348 CCGTGAGGGTCTTCACGAAGATCTGCATCTT 20155318
Score = 109 bits (120), Expect = 1e-18
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || || || || || ||||| || ||||||||||| |||| | |||| || ||
Sbjct 1136959 GAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTC 1137018
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || ||||||||||| || | |||||| || | | |||||| ||||| ||
Sbjct 1137019 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTC 1137078
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || || ||| |||| | | |||| ||| ||| || || | || || ||
Sbjct 1137079 CTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCACCTCCAAGGTGATGGT 1137138
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| ||||| || |||||||||| |||||
Sbjct 1137139 CTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 1137171
>seq2
Length=2985096
Score = 105 bits (116), Expect = 2e-17
Identities = 153/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| | ||| | ||||||||| || ||||| ||||| |||| ||||| | || ||
Sbjct 124178 AGGACCAAATGCAAAGTAGACTCCTTCTGGATATTGTAGTCGGACAAAGTGCGTCCGTCC 124119
Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| | ||||| ||||||||||| | | ||||||||| | | || || ||||| |
Sbjct 124118 TCCAACTGCTTT--CCGGCGAAGATCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTGT 124061
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
| || || || || || |||| | | | || ||| ||| || || | ||| || |
Sbjct 124060 CCTGGATCTTGGCCTTCACGTTCTCGATGGTATCGGAAGGCTCAACCTCCAAAGTGATGG 124001
Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| ||||| || || ||||||||||||| ||||||
Sbjct 124000 TCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 123967
Score = 100 bits (110), Expect = 7e-16
Identities = 152/213 (71%), Gaps = 5/213 (2%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| || ||||||||||| |||| ||||| | ||||| || |
Sbjct 123945 CAAG-TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGTCCATCCTCCA 123887
Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
||||| ||||||||||| || | ||||||||| | | || || ||||| || ||
Sbjct 123886 ACTGCTTT--CCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTG 123829
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|| || || ||| |||| | | | || ||| ||| || || | ||| || || ||
Sbjct 123828 GATCTTGGCCTTAACATTCTCGATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTCTT 123769
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
||| || || || |||||||| | ||||| ||
Sbjct 123768 GCCAGTCAGGGTTTTCACGAAAATTTGCATGTT 123736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153692480704280
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