Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20suzukii_20[refseq_20GCF_5F000472105.1_202013-09-30] 8,680 sequences; 232,923,092 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq3325 132 1e-25 seq4812 123 6e-23 seq1 111 4e-19 seq2 105 2e-17 >seq3325 Length=21082 Score = 132 bits (146), Expect = 1e-25 Identities = 158/211 (75%), Gaps = 5/211 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || |||||||||||||| | ||||| | ||||| || | Sbjct 19821 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTGCGACCATCCTCCA 19763 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| |||||||| || || | |||||| || | | |||||| ||||| || || Sbjct 19762 GCTGCTTT--CCGGCGAAAATGAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTG 19705 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || || ||| |||| | | | || ||| ||| ||||||||||| || ||||| Sbjct 19704 GATCTTGGCCTTCACATTCTCGATGGTATCAGAAGGCTCAACTTCAAGAGTGATGGTTTT 19645 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||| || | |||||| || |||| ||||||| Sbjct 19644 GCCGGTCAAAGTCTTGACAAAGATCTGCATT 19614 Score = 132 bits (146), Expect = 1e-25 Identities = 158/211 (75%), Gaps = 5/211 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || |||||||||||||| | ||||| | ||||| || | Sbjct 20049 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTGCGACCATCCTCCA 19991 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| |||||||| || || | |||||| || | | |||||| ||||| || || Sbjct 19990 GCTGCTTT--CCGGCGAAAATGAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTG 19933 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || || ||| |||| | | | || ||| ||| ||||||||||| || ||||| Sbjct 19932 GATCTTGGCCTTCACATTCTCGATGGTATCAGAAGGCTCAACTTCAAGAGTGATGGTTTT 19873 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||| || | |||||| || |||| ||||||| Sbjct 19872 GCCGGTCAAAGTCTTGACAAAGATCTGCATT 19842 Score = 116 bits (128), Expect = 9e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | || || || ||||| || ||||||||||| |||| | || | Sbjct 20517 GAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCG 20458 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || ||| |||||||||||||| | |||||| || | | ||| || || Sbjct 20457 TCCGTCCTCCAGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGGATGCCCTC 20398 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || ||||| || || | || | |||| ||| ||||||||||||||| Sbjct 20397 CTTGTCCTGGATTTTAGCCTTTACGTTTTCAATAGTGTCCGAAGGCTCTACTTCAAGAGT 20338 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || | |||||| ||||| | |||||| Sbjct 20337 GATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 20299 Score = 105 bits (116), Expect = 2e-17 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| | || || || ||||| || ||||||||||| |||| | || | || || Sbjct 19599 GAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTC 19540 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || ||| |||||||||||||| | |||||| || | | ||| || ||||| || Sbjct 19539 CTCCAGTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGGATGCCCTCCTTATC 19480 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || ||||| || ||| |||| | | || || ||| || || | |||||| || Sbjct 19479 CTGGATTTTGGCCTTCACATTCTCAATCGTATCGGAGGGCTCCACCTCCAAAGTAATGGT 19420 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || | |||||||| |||| ||||||||| Sbjct 19419 CTTTCCAGTCAAGGTCTTCACAAAGATCTGCATTTT 19384 Score = 100 bits (110), Expect = 7e-16 Identities = 155/217 (71%), Gaps = 12/217 (6%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || |||||||||||||| | ||||| | ||||| || | Sbjct 21047 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTGCGACCATCCTCCA 20989 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| |||||||| || || | |||||| || | | |||||| ||||| || || Sbjct 20988 GCTGCTTT--CCGGCGAAAATGAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTG 20931 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAA--CT-----CTCTACTTCAAGAGTAA 152067 ||||| || || | || | |||| ||| || ||| || |||||||| | Sbjct 20930 GATTTTCGCCTTTACGTTTTCAATAGTGTCCGAAGGCTCTTGGCTCCACCTCAAGAGTGA 20871 Query 152068 TAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || || | |||||| ||||| | |||||| Sbjct 20870 TTGTCTTTCCGGTCAAAGTCTTTACGAAAATCTGCAT 20834 Score = 98.7 bits (108), Expect = 2e-15 Identities = 143/200 (72%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCC 151965 || ||||| || || ||||||||||||| | || | ||||| || || ||||| | Sbjct 20267 GTCGACTCCTTCTGAATGTTGTAATCGGACAGGGTGCGACCATCCTCAAGCTGCTTT--C 20210 Query 151966 CGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTT 152025 |||||||||| || | |||||| || | | ||| || ||||| ||||| || || | Sbjct 20209 CGGCGAAGATGAGACGCTGCTGATCTGGGGGGATGCCCTCCTTGTCTTGGATCTTAGCCT 20150 Query 152026 TGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085 |||| | || | | |||| ||| || || || || || || || ||||| || |||| Sbjct 20149 TGACGTTTTCAATGGTGTCCGAAGGTTCCACCTCCAGGGTGATGGTCTTGCCAGTAAGAG 20090 Query 152086 TCTTCACGAAGACCTGCATT 152105 | || || |||| ||||||| Sbjct 20089 TTTTGACAAAGATCTGCATT 20070 Score = 98.7 bits (108), Expect = 2e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | ||| | ||| || || || |||||||||||||||| | || | || || Sbjct 20739 GAGAACCAAATGCAAAGTCGATTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTC 20680 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || ||| ||||||||||| | | |||||| || | | ||| || ||||| || Sbjct 20679 CTCCAGTTGTTTGCCGGCGAAGATCAATCGCTGCTGATCTGGGGGGATGCCCTCCTTGTC 20620 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || ||| | || | | ||||||| ||| ||||| | || || || Sbjct 20619 CTGGATCTTGGCCTTCACATTTTCAATGGTGTCTGATGGCTCAACTTCCAAGGTGATGGT 20560 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| || || ||||| || |||| ||||||| Sbjct 20559 CTTGCCAGTAAGTGTCTTGACAAAGATCTGCATT 20526 >seq4812 Length=908733 Score = 123 bits (136), Expect = 6e-23 Identities = 158/216 (73%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | ||| | || ||||| || || ||||||||||||| ||||| | ||||| Sbjct 620073 GAGAACCAAATGCAAGGTCGACTCCTTCTGAATGTTGTAATCGGACAAAGTGCGACCATC 620132 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 || || ||||| ||||||||||| || | |||||| || | | || || ||||| Sbjct 620133 CTCAAGCTGCTTT--CCGGCGAAGATGAGACGCTGCTGATCTGGGGGAATACCCTCCTTG 620190 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 ||||| || || |||||| | || | | |||||||| ||| || || || || || Sbjct 620191 TCTTGGATCTTGGCTTTGACGTTTTCAATGGTGTCTGAAGGCTCCACCTCCAGGGTGATG 620250 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || ||||| || ||||| || ||||||| ||||||| Sbjct 620251 GTCTTGCCAGTAAGAGTTTTGACGAAGATCTGCATT 620286 Score = 111 bits (122), Expect = 4e-19 Identities = 144/197 (73%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 151911 GACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGG 151968 ||||| || |||||||| ||||||| ||||| | || || || || ||||| |||| Sbjct 620500 GACTCCTTCTGGATGTTATAATCGGACAAAGTGCGACCGTCCTCAAGCTGCTTT--CCGG 620557 Query 151969 CGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGA 152028 |||||||||| | |||||| || | | || || ||||| ||||| ||||| || | Sbjct 620558 CGAAGATAAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTGGATTTTGGCCTTTA 620617 Query 152029 CAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCT 152088 | | || | | |||| ||| ||| || || || || || || ||||| || ||||| | Sbjct 620618 CGTTTTCAATGGTGTCCGAAGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTAAGAGTTT 620677 Query 152089 TCACGAAGACCTGCATT 152105 | ||||||| ||||||| Sbjct 620678 TGACGAAGATCTGCATT 620694 Score = 104 bits (114), Expect = 5e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 151905 AGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTC 151964 || || ||||| || ||||||||||| || | | || | || || || || || Sbjct 619858 AGGGTCGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCGTCCTCCAGTTGCTTG 619917 Query 151965 CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGT 152024 ||||||||||| || | ||||||||| | | ||||| ||||| ||||| || || Sbjct 619918 CCGGCGAAGATGAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCTTGGATCTTGGCC 619977 Query 152025 TTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGA 152084 ||||| | || | | | || ||| ||| ||||| |||||||| || || || || | | Sbjct 619978 TTGACGTTTTCAATGGTATCAGAAGGCTCGACTTCCAGAGTAATGGTCTTTCCGGTCAAA 620037 Query 152085 GTCTTCACGAAGACCTGCAT 152104 ||||||||||||| ||||| Sbjct 620038 GTCTTCACGAAGATTTGCAT 620057 Score = 89.7 bits (98), Expect = 1e-12 Identities = 137/194 (71%), Gaps = 1/194 (1%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || ||||||||||| |||| | || | || || || | Sbjct 620307 CAAG-TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCA 620365 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| |||||||||||||| | |||||| || | | || || ||||| ||||| | Sbjct 620366 GTTGTTTGCCGGCGAAGATAAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTCTTGGA 620425 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | | |||| ||| ||| || || || || || || |||| Sbjct 620426 TCTTGGCCTTGACGTTTTCAATGGTGTCCGAAGGCTCCACCTCCAGGGTGATGGTCTTGC 620485 Query 152077 CCGTGAGAGTCTTC 152090 | || ||||| ||| Sbjct 620486 CAGTAAGAGTTTTC 620499 >seq1 Length=22559587 Score = 111 bits (122), Expect = 4e-19 Identities = 152/211 (72%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||| ||||| || || ||||| || || | | || | |||||||| | Sbjct 20155527 CAAG-TGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATCTTCCA 20155469 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || |||||||| || | |||||| || | | |||||||| || || |||| Sbjct 20155468 GCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGAA 20155409 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||||| | || | | || ||| || || |||||||| || || |||| Sbjct 20155408 TCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACCTCAAGAGTGATGGTCTTGC 20155349 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||||| ||||||||||||| |||||| || Sbjct 20155348 CCGTGAGGGTCTTCACGAAGATCTGCATCTT 20155318 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || || || ||||| || ||||||||||| |||| | |||| || || Sbjct 1136959 GAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTC 1137018 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | |||||| || | | |||||| ||||| || Sbjct 1137019 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTC 1137078 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || ||| |||| | | |||| ||| ||| || || | || || || Sbjct 1137079 CTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCACCTCCAAGGTGATGGT 1137138 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| || |||||||||| ||||| Sbjct 1137139 CTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 1137171 >seq2 Length=2985096 Score = 105 bits (116), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | ||| | ||||||||| || ||||| ||||| |||| ||||| | || || Sbjct 124178 AGGACCAAATGCAAAGTAGACTCCTTCTGGATATTGTAGTCGGACAAAGTGCGTCCGTCC 124119 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || | ||||| ||||||||||| | | ||||||||| | | || || ||||| | Sbjct 124118 TCCAACTGCTTT--CCGGCGAAGATCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTGT 124061 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | || || || || || |||| | | | || ||| ||| || || | ||| || | Sbjct 124060 CCTGGATCTTGGCCTTCACGTTCTCGATGGTATCGGAAGGCTCAACCTCCAAAGTGATGG 124001 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| || || ||||||||||||| |||||| Sbjct 124000 TCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 123967 Score = 100 bits (110), Expect = 7e-16 Identities = 152/213 (71%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || ||||||||||| |||| ||||| | ||||| || | Sbjct 123945 CAAG-TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGTCCATCCTCCA 123887 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||||| ||||||||||| || | ||||||||| | | || || ||||| || || Sbjct 123886 ACTGCTTT--CCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTG 123829 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || || ||| |||| | | | || ||| ||| || || | ||| || || || Sbjct 123828 GATCTTGGCCTTAACATTCTCGATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTCTT 123769 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||| || || || |||||||| | ||||| || Sbjct 123768 GCCAGTCAGGGTTTTCACGAAAATTTGCATGTT 123736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153692480704280