Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq5503 345 5e-90 seq5134 345 5e-90 >seq5503 Length=77054 Score = 345 bits (382), Expect = 5e-90 Identities = 563/807 (70%), Gaps = 24/807 (3%) Strand=Plus/Plus Query 145575 GTAGCCCTCCAGCGCAAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAG 145634 |||||| | | | |||||||||| | ||| || || ||||||| |||| ||| | Sbjct 66221 GTAGCCAACGATCTCAAAGTCCTCGAAGCGGAAATCCTCGATGTCCTGCACCTGCCGCTT 66280 Query 145635 GATCCTGAGCCTGGGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCAC 145694 |||| ||| |||||||||| || || | | |||||| |||||||||||||| Sbjct 66281 GATCACCAGCTTGGGAAAGGGACGCGGCTTACGCTCCAGCTGCTCTTTCAGGGGCTCCAC 66340 Query 145695 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCC 145754 || || |||||||| |||| ||| |||| | ||| | ||||| || || | || || Sbjct 66341 ATGATTTAGGTAGACATGCGTGTCGCCCATGGTGTGTACAAAGTCTCCTGGTTTTAGACC 66400 Query 145755 CGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCC 145814 ||| | ||||||| ||||| ||| ||||||| |||| ||| |||||||||||||| || Sbjct 66401 CGTCACATGGGCGATCATGTGGGTGAGCAGGGCGTAGGAGGCGATGTTGAAGGGCACGCC 66460 Query 145815 CAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC----- 145869 ||| |||||||| | |||||||||||||||||||||||||| |||| || | Sbjct 66461 CAGGCCCATGTCGGCGCTCCGCTGGTACAGCTGGCAGGAGAGCTCGCCGCGCGTCTGTGA 66520 Query 145870 -ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928 |||||||||||| |||| |||||| |||||||||||||| ||| | |||| ||| Sbjct 66521 GACGTAGAACTGGGCCAGGCAGTGGCACGGCGGCAGGGCCATCTTGGGTATGTCCAGCGG 66580 Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAG 145988 |||||||| | | || || | |||| | ||| || ||||||| | |||| Sbjct 66581 ATTCCAGGCCGACATGATGATGCGCCTGTCCGAGGGATTATTCTTGATAGTGTCGATCAC 66640 Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTC-TTGGAGTCCACGTACGCGG 146047 | | |||||||| | ||||| || | ||||| |||| | | || ||||| | | Sbjct 66641 CTGGCGCAGCTGGTCGATGCCCTTGCCGCTGTAAT-TGTCGTCGCAGGTGCCGTACTCCG 66699 Query 146048 CCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCC------CGGGCTCCC 146101 ||||||| || | ||||||||| || || || || || ||||| | || ||||| Sbjct 66700 CCCCGAAATGACGCCACTGGAAGCCATACACCGGGCCGAGGTCGCCCACGGCGCGCTCCG 66759 Query 146102 TGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGA 146161 |||| |||||| | || ||||| ||||||| | ||| | |||||||| | | Sbjct 66760 TGTGGCCCAGCTTGTCC------AGGAACTCCCGGGTGCTGTTCCCATCCCAGATATGAA 66813 Query 146162 CGCCCCTCGCGGAGAGCTCATTGGAGTCCG--TGGACCCCCTGATGAACCAGAGCAGCTC 146219 || | | || ||| |||| ||||| ||| | || | |||||||||||||| Sbjct 66814 CGTTCTTGGCCTGCAGCAGCTTGGCGTCCGTCTGGCCAGCC--ACAAACCAGAGCAGCTC 66871 Query 146220 TTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAACTGGCCCCGCAG 146279 ||| ||| | | ||||||| | ||||||||||||||||||||| | |||| Sbjct 66872 CTCGGCCACCGCGCGGAAGAAGACGCGCTTGGTGGTCAGCAGGGGGAAGGATTCGCGCAT 66931 Query 146280 GGAGTACTTGGCCTGGTCCCCGAAGACGGACAGGGTGCCCACGCCCGTCCTGTCCCCCCT 146339 | | | |||| ||||| | |||||| |||||||| |||| | ||| || Sbjct 66932 GTCGAAGCGCATCTGGCTGCCGAACAGGGACAGCGTGCCCACCTCCGTGCGATCCGTCCG 66991 Query 146340 GCGCACCCCGTTCGCCAGGATCTCCCT 146366 ||| | || ||||| | ||| | ||| Sbjct 66992 CCGCTCGCCATTCGCGATGATGTTCCT 67018 >seq5134 Length=897107 Score = 345 bits (382), Expect = 5e-90 Identities = 563/807 (70%), Gaps = 24/807 (3%) Strand=Plus/Minus Query 145575 GTAGCCCTCCAGCGCAAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAG 145634 |||||| | | | |||||||||| | ||| || || ||||||| |||| ||| | Sbjct 891027 GTAGCCAACGATCTCAAAGTCCTCGAAGCGGAAATCCTCGATGTCCTGCACCTGCCGCTT 890968 Query 145635 GATCCTGAGCCTGGGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCAC 145694 |||| ||| |||||||||| || || | | |||||| |||||||||||||| Sbjct 890967 GATCACCAGCTTGGGAAAGGGACGCGGCTTACGCTCCAGCTGCTCTTTCAGGGGCTCCAC 890908 Query 145695 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCC 145754 || || |||||||| |||| ||| |||| | ||| | ||||| || || | || || Sbjct 890907 ATGATTTAGGTAGACATGCGTGTCGCCCATGGTGTGTACAAAGTCTCCTGGTTTTAGACC 890848 Query 145755 CGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCC 145814 ||| | ||||||| ||||| ||| ||||||| |||| ||| |||||||||||||| || Sbjct 890847 CGTCACATGGGCGATCATGTGGGTGAGCAGGGCGTAGGAGGCGATGTTGAAGGGCACGCC 890788 Query 145815 CAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC----- 145869 ||| |||||||| | |||||||||||||||||||||||||| |||| || | Sbjct 890787 CAGGCCCATGTCGGCGCTCCGCTGGTACAGCTGGCAGGAGAGCTCGCCGCGCGTCTGTGA 890728 Query 145870 -ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928 |||||||||||| |||| |||||| |||||||||||||| ||| | |||| ||| Sbjct 890727 GACGTAGAACTGGGCCAGGCAGTGGCACGGCGGCAGGGCCATCTTGGGTATGTCCAGCGG 890668 Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAG 145988 |||||||| | | || || | |||| | ||| || ||||||| | |||| Sbjct 890667 ATTCCAGGCCGACATGATGATGCGCCTGTCCGAGGGATTATTCTTGATAGTGTCGATCAC 890608 Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTC-TTGGAGTCCACGTACGCGG 146047 | | |||||||| | ||||| || | ||||| |||| | | || ||||| | | Sbjct 890607 CTGGCGCAGCTGGTCGATGCCCTTGCCGCTGTAAT-TGTCGTCGCAGGTGCCGTACTCCG 890549 Query 146048 CCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCC------CGGGCTCCC 146101 ||||||| || | ||||||||| || || || || || ||||| | || ||||| Sbjct 890548 CCCCGAAATGACGCCACTGGAAGCCATACACCGGGCCGAGGTCGCCCACGGCGCGCTCCG 890489 Query 146102 TGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGA 146161 |||| |||||| | || ||||| ||||||| | ||| | |||||||| | | Sbjct 890488 TGTGGCCCAGCTTGTCC------AGGAACTCCCGGGTGCTGTTCCCATCCCAGATATGAA 890435 Query 146162 CGCCCCTCGCGGAGAGCTCATTGGAGTCCG--TGGACCCCCTGATGAACCAGAGCAGCTC 146219 || | | || ||| |||| ||||| ||| | || | |||||||||||||| Sbjct 890434 CGTTCTTGGCCTGCAGCAGCTTGGCGTCCGTCTGGCCAGCC--ACAAACCAGAGCAGCTC 890377 Query 146220 TTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAACTGGCCCCGCAG 146279 ||| ||| | | ||||||| | ||||||||||||||||||||| | |||| Sbjct 890376 CTCGGCCACCGCGCGGAAGAAGACGCGCTTGGTGGTCAGCAGGGGGAAGGATTCGCGCAT 890317 Query 146280 GGAGTACTTGGCCTGGTCCCCGAAGACGGACAGGGTGCCCACGCCCGTCCTGTCCCCCCT 146339 | | | |||| ||||| | |||||| |||||||| |||| | ||| || Sbjct 890316 GTCGAAGCGCATCTGGCTGCCGAACAGGGACAGCGTGCCCACCTCCGTGCGATCCGTCCG 890257 Query 146340 GCGCACCCCGTTCGCCAGGATCTCCCT 146366 ||| | || ||||| | ||| | ||| Sbjct 890256 CCGCTCGCCATTCGCGATGATGTTCCT 890230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590034513621320