Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq5136 102 1e-16 >seq5136 Length=173398 Score = 102 bits (112), Expect = 1e-16 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | ||||| || || || ||||| || || | ||| | ||| | Sbjct 116346 AATGCAGATCTTTGTGAAGACCCTCACTGGAAAAACCATCACCTTGGAGGTCGAACCCTC 116287 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| || ||| | || ||||| || ||||| ||||| || || || ||||| Sbjct 116286 CGATACCATCGAGAATGTGAAGGCTAAAATCCAGGATAAGGAAGGAATCCCCCCAGATCA 116227 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || | | || ||||| ||||||||||| ||||| | || || | |||||||| Sbjct 116226 GCAGCGATTGATCTTTGCCGGAAAACAATTGGAGGACGGACGCACCCTGTCCGATTATAA 116167 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || ||||| || |||||||| |||||| | ||| | || || || || Sbjct 116166 CATCCAGAAAGAGTCCACTTTGCACTTGGTTCTCCGTCTTCGTGGAGGAAT 116116 Score = 100 bits (110), Expect = 4e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| || || |||||||| || || | ||| | || | | Sbjct 115661 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAAACAATCACCCTGGAGGTCGAGCCCTCT 115602 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | || ||||| ||||| || || || || || || ||||| Sbjct 115601 GATACGATTGAGAATGTGAAGGCTAAAATCCAAGACAAGGAGGGAATCCCCCCAGATCAG 115542 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || ||||| || ||||| || | |||||| | || || | || || || Sbjct 115541 CAGCGTCTCATTTTCGCTGGAAAGCAGCTTGAGGATGGCCGTACTCTTTCTGACTACAAC 115482 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || ||||| |||||||||||||| || ||| | || |||||||| Sbjct 115481 ATCCAGAAGGAATCGACTTTGCATTTGGTGTTGCGTCTTCGTGGTGGTAT 115432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755401862134400