Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq5136 89.7 8e-13 >seq5136 Length=173398 Score = 89.7 bits (98), Expect = 8e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128 ||||| || ||||| || ||||| || |||||||| || || || | | || || Sbjct 116137 ACCAAGTGCAAAGTGGACTCTTTCTGGATGTTATAATCGGACAGGGTGCGTCCGTCCTCC 116196 Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 ||||||||||| ||||| ||||||| |||||||| || || |||||||| ||||| || Sbjct 116197 AATTGTTTTCCGGCAAAGATCAATCGCTGCTGATCTGGGGGGATTCCTTCCTTATCCTG 116255 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128 |||||||| | |||||||| || || || ||||| |||||||| | | ||| || Sbjct 116365 ACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCA 116424 Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 | || || |||||||| ||||| | |||||||| ||||||||||| || || ||||| Sbjct 116425 AGCTGCTTGCCAGCAAAGATCAAACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCTTG 116483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743473117039360