Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_004681.1 Length=75931 Score E Sequences producing significant alignments: (Bits) Value seq1319 228 4e-55 >seq1319 Length=24325 Score = 228 bits (252), Expect = 4e-55 Identities = 519/775 (67%), Gaps = 22/775 (3%) Strand=Plus/Plus Query 66679 GGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCC 66738 ||| || ||||| ||||| ||| | | ||||| |||||||| || || || || Sbjct 21697 GGATGTAATTCCTACCGGTTCTCTGGG-CTGGATATTGCTCTGGGTATTGGTGGCCTGCC 21755 Query 66739 GAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCT 66798 | | ||||| ||| | |||||||| || || ||| ||| || || | || ||| || Sbjct 21756 GCGTGGCCGCGTGATTGAAATCTATGGGCCGGAAAGTTCCGGTAAAACCACGCTGGCGCT 21815 Query 66799 CCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCA 66858 || || | || | ||||||||| || |||| | ||||| || ||||| || || Sbjct 21816 GCATGCTATTGCAGAAGCGCAGAAGCGTGGCGGCACCTGCGCCTTTATTGACGCCGAACA 21875 Query 66859 CTCCCTGGACCCCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGT 66918 | | |||||||||| || |||||| ||| || ||||| | || ||||| || | Sbjct 21876 CGCGCTGGACCCCGGCTATGCCAAGAAGCTGGGCGTGGATGTTGATAACCTGCTGATCAG 21935 Query 66919 TCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGA 66978 ||||| ||| | || || ||||| |||||||| | ||| || || || || | Sbjct 21936 CCAGCCCGACGCCGGAGAACAGGCGCTGGAGATTGCTGATACGCTGGTGCGTTCCGGTG- 21994 Query 66979 GCTGTCCATCGTC--GTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 67036 | | || || || || || |||||| || ||||| ||||| || || || ||| Sbjct 21995 -CCATTGATGTTCTGGTGGTGGATAGTGTGGCTGCTCTGGTTCCGCGTGCGGAACTGGAA 22053 Query 67037 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGC 67096 ||||| || || ||||| ||||| || ||||| || || || ||| ||||| ||||| Sbjct 22054 GGCGATATGGGTGACAGCCACGTGGGGCTGCATGCCCGGCTGATGAGCCAGGCGCTGCGC 22113 Query 67097 AAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGC 67156 ||||| || || || | || || ||||||| ||| | ||| | || ||| | || Sbjct 22114 AAGCTGACCGGTTCCTTATCACGCTCCAACACCATGATGATCTTTCTGAATCAGATTCGT 22173 Query 67157 GAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTG 67216 ||| || || | || | | |||| || ||||| || ||||| || || ||| Sbjct 22174 CTGAAAATTGGTGTCATGTTCGGCAACCCG---GAAACCACAACCGGCGGCAATGCCTTG 22230 Query 67217 AGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGAT 67276 | |||||| || || || || | ||| |||| || | | || ||||| || Sbjct 22231 AAGTTCTATGCATCCGTTCGGCTTGATATCCGCCGTGTGGGTTCCATCAAGGACAAGGAC 22290 Query 67277 GAGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCAC 67336 |||| ||| || |||| ||||| ||||| || |||||||||||| |||| |||||| | Sbjct 22291 GAGGTTGTGGGTAACCAGACCCGCGTGAAGGTGGTCAAGAACAAGATGGCGCCGCCGTTC 22350 Query 67337 CGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTC---GAACTC 67393 || | | || || | || ||||||| || |||||| | ||||| ||||| Sbjct 22351 CGGCAGGTGGAATTTGACATCATGTACGGTGAAGGCATC---AGCAAGGTCGGGGAACTG 22407 Query 67394 CTCGACCTGGCCGTGTCGCAGGGCC----TGGTGAAGAAGTCGGGCGCCTGGTTC 67444 |||| || | || || |||| ||||| | || || ||||| |||||| Sbjct 22408 ATCGATCTTGGGGT----CAAGGCCGGTGTGGTGGAAAAATCCGGCGCATGGTTC 22458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242837431535396