Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_004813.1 Length=57930 Score E Sequences producing significant alignments: (Bits) Value seq1477 98.7 4e-16 >seq1477 Length=1545 Score = 98.7 bits (108), Expect = 4e-16 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 29570 CCAGGGCTGGAAGCTGGGCGGGGCCATAAAAACCACCGAGCGCAAACTGGCT-GAGGGAG 29628 |||||||||||| || ||||| || |||||| | || || ||||| ||| || | | Sbjct 443 CCAGGGCTGGAAACTCACAGGGGCAATCAAAACCGCAGAACGGAAACTTGCTGGACGTAC 384 Query 29629 TACTGGTGCATGGTGGTCAGCCACTGATGGCCTGGTGCGTTGGCAATGCCCGGGTGGAGC 29688 | ||| | ||| |||| ||||| | ||||| ||| || || |||||||| ||||| Sbjct 383 T-CTGATCCATTGTGGGCAGCCCATCATGGCATGGGCAGTCGGAAATGCCCGTGTGGAAG 325 Query 29689 CTAAAGGTAACGCCATTCTTATTACCAAACAGGCCAGCGGACGGGGGAAAATTGACCCGC 29748 | ||||| |||||| || |||| || |||||| || || || || ||||| | Sbjct 324 CGAAAGGCAACGCCGTTGTTATAGAAAAGCAGGCCGCAGGTTGGTCAAAGATAGACCCTC 265 Query 29749 TGATGGCGCTCTTCAATGCGGTATCCCTGATGTCCCTGAATCCGGAGCCG 29798 | ||| |||| ||| | | ||| || ||||| || ||||| ||||| Sbjct 264 TTATGTCGCTTTTCGACACAGTAGTGCTCATGTCTCTCAATCC--AGCCG 217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185241787996232