Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_006552.1 Length=65195 Score E Sequences producing significant alignments: (Bits) Value seq1670 104 1e-17 >seq1670 Length=1021 Score = 104 bits (114), Expect = 1e-17 Identities = 145/203 (71%), Gaps = 3/203 (1%) Strand=Plus/Minus Query 11207 TCGGTGCTGTAGTGGTCCTGGCCGTCCTGGCCCTGCCACTTGCGGGTGCGTAGGCTGCCT 11266 ||||| |||||| ||||| ||||||||| |||||||| || ||||| | || |||| Sbjct 665 TCGGTTGTGTAGTTGTCCTTGCCGTCCTGCCCCTGCCATTTCCGGGTCTGGAGTGAGCCT 606 Query 11267 TCGATGTAGACCTGGGAGCCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCAGCCGGCCA 11326 |||| ||||||| | |||||| |||||| | | | || | || ||||| || || Sbjct 605 TCGAGATAGACCTTGCGGCCCTTGCGCAGGAAGCGTTCCGCCACATCTGCCAGACGTTCA 546 Query 11327 ---AAGAGCACGACCCGGTGCCACTCGGTGCGCTCCTGCTGCTGGCCGGTCTGCTTGTCT 11383 || | |||| || ||||| ||||||||||| || | | ||| | ||| ||| Sbjct 545 TTGAAAATAACGATGCGATGCCATTCGGTGCGCTCACGCCGTTCGCCAGACTGGCGGTCG 486 Query 11384 TTCCAGCTTTCGCTAGTGGCCAG 11406 |||||| | ||| |||||||| Sbjct 485 TTCCAGGTATCGGACGTGGCCAG 463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 208484631965428