Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq5566 159 3e-34 seq5136 100 3e-16 seq5516 98.7 1e-15 >seq5566 Length=752539 Score = 159 bits (176), Expect = 3e-34 Identities = 141/176 (80%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 71717 GAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACT 71776 ||||| || || ||||| | || ||||||||||||||||||||||||||||||||||| Sbjct 126194 GAGGGCAAGATGCACGGCTTTCTGCGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACC 126135 Query 71777 CAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGAC 71836 || || || |||||||| |||||| | ||| | ||||| | ||||| |||||| Sbjct 126134 GCCACCCCGGAACAGGCGCTGGAGTATGCGATTCTGTTGAACGACAAGTACAGCCTCGAC 126075 Query 71837 GGTCGCGATCCTAACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGA 71892 || |||||||| ||||| |||||||| ||||||||| |||| ||||| | ||||| Sbjct 126074 GGACGCGATCCCAACGGCTATGTCGGCTGCATGTGGTCCATTGGCGGTGTCCACGA 126019 Score = 82.4 bits (90), Expect = 7e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 66544 CGCGTATACTGGGCCAAAAAGATTTTGGAGTGGACGTCAACACCGGAAGAGGCTTTGAAT 66603 ||| | |||||||||||||||||| | |||||||| | || |||||| |||| || | Sbjct 126170 CGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACCGCCACCCCGGAACAGGCGCTGGAG 126111 Query 66604 CGTGCGATTTACTTGAATCAAAAGTATGCTGTCGACGGTTGCGATCCCAGCGGTTATGTA 66663 ||||||| ||||| | ||||| ||||||| ||||||||| ||| ||||| Sbjct 126110 TATGCGATTCTGTTGAACGACAAGTACAGCCTCGACGGACGCGATCCCAACGGCTATGTC 126051 Query 66664 GGATG 66668 || || Sbjct 126050 GGCTG 126046 >seq5136 Length=173398 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | || || || || || || ||||| | |||||| | ||| | || || Sbjct 116118 AATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATCACCCTGGAAGTCGAGCCATC 116059 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||||||||||| | || || ||||| ||||| || || || ||||| ||||| Sbjct 116058 CGACACCATCGAGAATGTAAAGGCCAAGATCCAAGACAAGGAGGGAATCCCTCCAGATCA 115999 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || | ||||| | || ||||||||||| || || | | | | | ||| || || Sbjct 115998 GCAGCGTCTCATCTTCGCTGGCAAACAACTGGAGGACGGACGCACCCTGTCCGATTACAA 115939 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| || || || ||||| ||||| ||||||| | ||| | ||||||| Sbjct 115938 CATCCAGAAGGAGTCTACCCTCCATTTGGTCCTCCGTCTTCGTGGAGGAA 115889 >seq5516 Length=367667 Score = 98.7 bits (108), Expect = 1e-15 Identities = 171/246 (70%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 119626 TGGCCGCTCCGAACCGCTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCT 119685 ||||| |||| | |||| |||||||||||| || ||||| || || |||||||| | Sbjct 269680 TGGCCACTCCCATACGCTGGTACTCGCCCACCTTCTTCTCAAAGAAGTTGGTCTTGCCGT 269739 Query 119686 CAAGAGATATGTTATTCATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGC 119745 | || || || | | ||| || | ||| || || || ||| | |||| || || Sbjct 269740 CCAGCGAGATCATCTCCATGAAGTTGAAGGGGTTCTTCGTATTGTAGATCTTGCCGACGC 269799 Query 119746 CCAACTCGAACAACAGTCGATCTGCCACAAACTCGATGTATTCGCACAT-GGATTGCGAA 119804 |||| || | || || ||||| ||||| ||||||||||| | |||| ||| || || Sbjct 269800 CCAATTCCACCAGCAAGCGATCCGCCACGAACTCGATGTACTGCGACATCAGATCGC-AA 269858 Query 119805 TTCATGCCCAACATAGCGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACC 119864 |||||||| | | || || | |||| ||| | ||| |||| ||||||| | || Sbjct 269859 TTCATGCCGATGAGGTTCACGGGCAGGGCATCGGTGAGGAACTCCTGTTCAATGGCCACT 269918 Query 119865 GCTTCT 119870 || ||| Sbjct 269919 GCATCT 269924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478628097855760