Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq4881 109 6e-19 >seq4881 Length=334723 Score = 109 bits (120), Expect = 6e-19 Identities = 224/331 (68%), Gaps = 9/331 (3%) Strand=Plus/Minus Query 127542 TGCACGGGTTACACGTGCACGAGTTCGGCGACACGTCGAACGGTTGCACGTCGGCGGGGG 127601 ||||||| || ||||||||||||||||| |||| | ||||| |||| |||| | || Sbjct 297071 TGCACGGCTTCCACGTGCACGAGTTCGGGGACAACACCAACGGCTGCATGTCGTCCGGAC 297012 Query 127602 AACACTTCAATCCCACCGGTATGGATCACGGAGCGCCCA---ACGCGCTCGTTCGTCACG 127658 ||||||||||||| || | ||| ||||| || |||| ||| | | |||||| Sbjct 297011 CCCACTTCAATCCCAAGGGCAAGGAGCACGGCGCTCCCACCGACGAGAAC---CGTCACC 296955 Query 127659 TTGGCGACCTGGGCAACGTGGAGGCGGCTAGCAGCAATTCTTTGACCGAAGTCAACATCA 127718 | |||||||| |||||| | || ||| | | || | | ||| | |||| ||||| Sbjct 296954 TGGGCGACCTTGGCAACATTGA---GGCCACCGGCGACTGCCCCACCAAGGTCAGCATCA 296898 Query 127719 TCGACCACGTCATGTCTCTGTACGGACCGAACAGCGTCATCGGTAGGAGTCTGGTCGTGC 127778 |||| | || | || | ||| | ||||| ||||||| | | |||| || | Sbjct 296897 CCGACTCCAAGATCACGCTTTTCGGCGCCGACAGCATCATCGGCCGCACCGTGGTGGTCC 296838 Query 127779 ACACGGATCGTGACGATCTCGGCCTGACCGATCATTATTTGAGCAAAACCACCGGCAACT 127838 || | ||| || ||||||||| | | || | ||||||| |||| |||||| Sbjct 296837 ACGCCGATGCCGATGATCTCGGCAAGGGTGGCCACGAGCTGAGCAAGTCCACGGGCAACG 296778 Query 127839 CGGGCGGTCGGTTGGGGTGCGGGATCATTGG 127869 | |||| || | || ||||| |||| || Sbjct 296777 CTGGCGCCCGAATTGGCTGCGGCGTCATCGG 296747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537564674010680