Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq5136 91.5 1e-13 >seq5136 Length=173398 Score = 91.5 bits (100), Expect = 1e-13 Identities = 163/238 (68%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 21823 AATAGTGCAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAA 21882 |||| | ||| ||||| || ||| | || || || || ||||| ||||| ||| |||| Sbjct 117040 AATAATCCAACATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCTTGGAGG 116981 Query 21883 CGGAAGCCGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTAC 21942 ||| | | || ||| | | || | ||| || || ||||| |||||| | | Sbjct 116980 TGGAGCCTTCCGATACGATTGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGTATTC 116921 Query 21943 CTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGG 22002 | | |||| ||| || | ||||| || || || || || |||||| | || || Sbjct 116920 CCCCAGACCAGCAGCGATTGATCTTCGCCGGAAAGCAGCTCGAAGATGGACGCACCCTGT 116861 Query 22003 CCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||| ||||| || ||||||||||| || |||||| |||| | ||| | || ||||| Sbjct 116860 CCGACTACAACATCCAGAAGGAATCCACCCTTCATTTGGTTCTCCGTCTCCGCGGAGG 116803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358099777484482