Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_009803.1 Length=84201 Score E Sequences producing significant alignments: (Bits) Value seq1178 105 4e-18 >seq1178 Length=17935 Score = 105 bits (116), Expect = 4e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 14986 ATAAAACTCGTCCTCCACCACGGAGTAGCGGGCCGAAATCTCGTTCACGCTCGCCGTGCG 15045 ||| ||||| |||| | ||| |||||||| ||| ||||||||||| ||| | || Sbjct 12141 ATAGAACTCACTGTCCAGAATGGAATAGCGGGCAGAATATTCGTTCACGCTGGCCATACG 12082 Query 15046 GTGGCGGAACCATTGGCGGGCCACAAAGATGGGAGCCTTGACGTGGAACTTGAACTCCAC 15105 |||||| | ||| || ||||| | |||||||| |||||||| ||||||| ||| Sbjct 12081 GTGGCGAATCCACTGCCGGGCAATGAAGATGGGCAGTTTGACGTGAAACTTGATCTCACA 12022 Query 15106 CATCTCAAAGGGCGACCAATGCTCGTGCTTGAGCAGGTAGCGGATGAGTTTTTCGTCATC 15165 ||||||||| || || |||| |||| | |||||||||||| || | || || Sbjct 12021 CATCTCAAACGGTGAGGAATGGCGGTGCCGCATCAGGTAGCGGATCAGCCCGGCATCTTC 11962 Query 15166 CCTAACGGTCTTGGTGCCCTTGCCATAGGAGACCCTAGCCGCCCGAACAAT 15216 ||| | ||||||| ||| ||||| || | || ||| | ||||| Sbjct 11961 AGAAACCTTGCGGGTGCCCCGGCCGTAGGAAACGCGTGCTGCCTGCACAAT 11911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 269299582470906