Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5134 134 2e-26 >seq5134 Length=897107 Score = 134 bits (148), Expect = 2e-26 Identities = 736/1155 (64%), Gaps = 29/1155 (3%) Strand=Plus/Plus Query 105692 TGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTG 105751 ||||||||||| ||||| ||| || | ||| ||||| | |||| ||||| | | Sbjct 539265 TGACTCTGGTCTATGAACGCACCCCGATCTGCGGCCATTTTAATGGTGGACTTCACCGAG 539324 Query 105752 ATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGA---GATATTT 105808 ||||||||||| || ||| |||| | || | | |||||| || || ||||||| Sbjct 539325 ATTTCCCACACGGTCTTGTACAGAT-CGCGA-ACCTTCTGGGGAATG-GACTCGATATTT 539381 Query 105809 TGAATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCA-AAGACCAAT 105867 || || || |||| | || || | | |||||| || | | ||| ||| ||| Sbjct 539382 TGGATGGAGCCCCTGCTCGAGATGATCTGGTTCTTCATGTCGTCGTCCCACAAGTCCAG- 539440 Query 105868 CTTCTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCT 105927 || | | || || | | | ||| | ||| || | | ||||| || | || | Sbjct 539441 CTCCGTTAGGTCCCTCAGCAAATGATGGTTAACCACCTGGAACTCGCCAGACAGCACGCG 539500 Query 105928 TCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGC 105987 || || || || || |||||||| || ||| |||| || || |||| || || || Sbjct 539501 CCTGGTGTAAATATTTGTGGTGTAGGGCTCGAAGGATTCGTTGTTGCCCATTATCTGAGC 539560 Query 105988 GGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGAT 106047 || ||||| || ||||| || || | | || ||| || | ||| | | |||||| Sbjct 539561 AGTAGAGGCCGTGGGCATGGGAGCGACAAGCAGGGAGTTCCGGACACCGTGCTGCTTGAT 539620 Query 106048 GCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTT-CACCTT--CCCACATATC 106104 | ||||| || | |||||| | || || ||| | |||| ||||||| || Sbjct 539621 GGACTCCTTCAGTTTTTGCCAGTCCCAC---AGATTCGTTGGCTCCTTGTCCCACATGTC 539677 Query 106105 AAATTGAAGCAC-CCCTTGGG-ACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGG 106162 | || || | |||||| ||| || | ||||| | || || |||| |||| | Sbjct 539678 GTACTGCAGAATTCCCTTGCTCACGGGGCTG--CCCTCGTAGGTTTCGTAGGGTCCTTCG 539735 Query 106163 GCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGA 106222 | |||| ||| ||||| || ||||||| ||| || ||||| || || || | Sbjct 539736 ATCTGCGCCAGTTCGCAGCTGGCTTCCAGGGCGCCGTAGTAGATGGTCTCGAATATCTGC 539795 Query 106223 GCATTCATCT--CCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACAT 106280 |||| ||| || || || ||| | | | | || | ||| | | | Sbjct 539796 TGGTTCAAGAGGCCT--GCCTCCTCGCTTTCATAGGGGAATCGCATGAGAATCAGGGCGT 539853 Query 106281 CCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAG 106340 | |||| || |||||||| | || | ||| | || | || || ||||| || Sbjct 539854 CAGCGAATCCCTGAACACCGATGCCCACAGGGCGATGCCTCAAGTTGGACTTCTTTGCC- 539912 Query 106341 TCTCA-ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTT 106399 ||| | ||||||||| || |||| |||| ||| ||||||||||| || |||| Sbjct 539913 TCTGGCAGGGGATAAAAGTTGATGTCGATGATCTTGTTGAGATTTTTGGTCACCGTCTTG 539972 Query 106400 GTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGA 106459 || | ||| | || || | | ||| | || |||| ||||| || | Sbjct 539973 GTAACTTCCTTGAGCTTCTTGAAGTCATACGTCT---TCTCGGGTGTGACAAACATATTG 540029 Query 106460 AGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATT 106519 |||||||| || ||||| ||||| || || ||||||| | |||||| | ||| Sbjct 540030 AGGGCGATCGAGGCCAAGTTGCAGACGGCAATCTCATCAGGCGAGGAGTACTCGACGATT 540089 Query 106520 TCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTG 106579 || || ||||||||| | ||| || || || | ||||| ||||| ||||| |||| Sbjct 540090 TCGGTGCACAAGTTGCTGCACTTGATGGTGCCGACATTCTGCTGGTTGCTCTTCCGGTTG 540149 Query 106580 CACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCC 106639 || ||||||||| | ||||||||||| |||| || ||| ||| | || | || || Sbjct 540150 CAGGCATCCTTGAACAGCATGTAGGGGTTCCCAGTTTCCACCTGAGCCTCAATGATGGCG 540209 Query 106640 TTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGT 106698 ||| | | | | || || | |||||| || ||||| ||||||||| Sbjct 540210 AACCAAAGGGACTGAGCCT-TCACCGTTCGGTTGGCACGACCCTCTTGCTCGTACTTCTC 540268 Query 106699 GTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACA 106758 ||| | ||| ||||| || ||| | | ||| || || || |||| || || Sbjct 540269 GTACAACCTTTCGAACTCATCGCCCCACACATCGTGAAGGCCGGGGCATTTGTGGGGGCA 540328 Query 106759 GAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 106818 | || ||||| | ||| |||| || |||||||| || || || || |||||||| Sbjct 540329 CATGAGCGACCAATCGCCATTGGCCTCGACGCGCTTCATAAAGAGATCGGGTATCCACAG 540388 Query 106819 GGATGAAAAGAGATC 106833 || | || ||||| Sbjct 540389 GGCGTAGAACAGATC 540403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589938520500920