Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq5136 134 1e-26 seq4121 98.7 8e-16 >seq5136 Length=173398 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||| ||||||||||| || || || |||||||| | | ||| | |||| || Sbjct 116365 ACCAAATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCA 116424 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || ||||| ||||||||||| ||||| || ||||| || || || ||||| Sbjct 116425 AGCTGCTTGCCAGCAAAGATCAAACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCTTGG 116484 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| ||||||| | || | ||||| || | || ||||| || |||| || ||| Sbjct 116485 ATTTTGGCTTTTACATTCTCAATTGTGTCGGATGGCTCGACTTCCAGGGTGATGGTCTTG 116544 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || ||||| |||||||| Sbjct 116545 CCAGTCAGCGTCTTCACAAAGATCTGCAT 116573 Score = 107 bits (118), Expect = 2e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 ||||||||||| || || || || || || ||||| || | | ||| | | || ||| Sbjct 116593 ACTAAATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGTCCGTCCTCC 116652 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||| || || || || ||||| ||||| ||||| || ||||| || || || || || Sbjct 116653 AGTTGTTTGCCGGCGAAGATCAATCGCTGCTGATCTGGGGGAATTCCCTCCTTGTCCTGG 116712 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| || || |||| | ||||| || | || || || || |||| |||||| Sbjct 116713 ATTTTAGCCTTGACGTTTTCAATGGTGTCTGAAGGCTCAACCTCCAGGGTGATGGTTTTG 116772 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 || || | || || ||||| ||||||||| | |||| ||| Sbjct 116773 CCAGTGAGGGTCTTCACAAAGATCTGCATGCCTCCGCGGAGA 116814 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | | ||| | ||| ||||||||||| ||||| || || || ||||| |||| Sbjct 116803 CCTCCGCGGAGACGGAGAACCAAATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 116862 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| || | ||||| || || || ||||| ||||| || || || ||| Sbjct 116863 AGGGTGCGTCCATCTTCGAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGA 116922 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || ||||| || || || || ||| | || | || || || | ||||| Sbjct 116923 ATACCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATCGTATCGGAAGGCTCCACC 116982 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || | |||| || ||||| || || || || ||||| ||||||||| Sbjct 116983 TCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 117030 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| || || | || || || || || || ||||| || | | || | |||| || Sbjct 115224 AACCAAGTGCAAAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGTCCATCTTC 115283 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 | ||||| || || || ||||||||||| ||||| || || ||||| || || ||||| Sbjct 115284 AAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGGATGCCCTCCTTGTCTTG 115343 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 ||||| || ||| | || | || ||||| | ||| || || || |||| || || Sbjct 115344 GATTTTAGCCTTCACATTCTCGATGGTATCAGAGGGTTCGACCTCCAGGGTGATGGTCTT 115403 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||| || ||||| || || ||||||||||| Sbjct 115404 GCCAGTCAAAGTCTTCACGAATATCTGCAT 115433 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| || || ||||| | || ||||| || || || ||||| || | | ||| | | | Sbjct 115446 ACGCAACACCAAATGCAAAGTCGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCC 115505 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | ||||| || || || || | |||||| ||||| || || || || || || Sbjct 115506 ATCCTCAAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGATCTGGGGGGATTCCCTCCTT 115565 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| ||||| || ||| | || | || ||||| | || || || || |||| Sbjct 115566 GTCTTGGATTTTAGCCTTCACATTCTCAATCGTATCAGAGGGCTCGACCTCCAGGGTGAT 115625 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||||||||| | || || || || |||||||| Sbjct 115626 TGTTTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 115661 >seq4121 Length=254077 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||||| | ||| | || || || ||||| || || ||||| || || ||||||| Sbjct 189723 CCTCCTCGAAGACGGAGCACCAAGTGGAGGGTTGACTCCTTTTGGATGTTATAATCGGAT 189782 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | |||| |||| ||||| || || || ||||||||||| ||||| || || Sbjct 189783 AGAGTGCGTCCATCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGG 189842 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || || || || || || || || | || | || || || | ||| || Sbjct 189843 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTATCGGAGGGTTCGACC 189902 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || | || || ||||| | ||| || || || |||||||| Sbjct 189903 TCAAGGGTAATGGTCTTTCCGGTCAGAGTCTTCACGAAGATCTGCAT 189949 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||| | ||||| || || || || ||||| |||| | ||| | |||| ||| Sbjct 189057 ACCAAATGCAAAGTAGACTCCTTCTGGATGTTGTAGTCGGATAGAGTGCGTCCATCCTCC 189116 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||||||||| ||||| || || || || || || ||||| Sbjct 189117 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCTTGG 189176 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || | || | || || || | || || || | ||||| || ||| Sbjct 189177 ATCTTAGCCTTCACGTTCTCAATGGTATCGGATGGCTCGACCTCCAAAGTGATGGTCTTG 189236 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || | ||| || || || ||||||||| Sbjct 189237 CCAGTAAGAGTCTTGACGAAGATCTGCATG 189266 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||| | ||||| || || || || ||||| || | | ||| | | || ||| Sbjct 189969 ACCAAATGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGTCCGTCCTCC 190028 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||||||||| ||||| || || || || || || || || Sbjct 190029 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGG 190088 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || ||| | || | || ||||| | ||| || || | ||||| || ||| Sbjct 190089 ATCTTGGCCTTCACATTCTCGATGGTATCAGAGGGTTCAACCTCCAAAGTGATGGTCTTG 190148 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || | || || || || ||||||||| Sbjct 190149 CCAGTCAGGGTCTTGACGAAGATCTGCATG 190178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396250711656681