Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq5085 129 8e-25 >seq5085 Length=323726 Score = 129 bits (142), Expect = 8e-25 Identities = 153/204 (75%), Gaps = 5/204 (2%) Strand=Plus/Minus Query 197089 TAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCCT 197148 || ||||||||||| || | || || ||||| |||| | ||| || ||| |||| Sbjct 82929 TAGCAGGCGAGTAAAAATCCTCCATACGTTCCAGTTCGCCGGCCCTTGCCTTTGTAGCCG 82870 Query 197149 CCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCAT--GTAATCTTTCTTCAGTT 197206 || || |||||||||||||| | ||||| ||| || || |||||| |||||||||| Sbjct 82869 CCTATCACCACCAGATCCAGTGAGTCGCCCACA--TTGGATAGGTAATCCTTCTTCAGTT 82812 Query 197207 TGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTGA 197266 | ||||| | | |||||||| || ||||| ||||| || | ||||||| ||||||| Sbjct 82811 TCAGCCAATTCCGGGATCTCTTCGCTATCTCATAGGTGGCCTCCTCGTCCAGAGTCTTGA 82752 Query 197267 TCATCAATCCCTCGCAATCTTCCT 197290 ||| | |||||||||| ||||| Sbjct 82751 CCATAAGACCCTCGCAAT-TTCCT 82729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676681103865040