Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq1140 82.4 8e-11 >seq1140 Length=2946 Score = 82.4 bits (90), Expect = 8e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 32003 GCCGAGCACGGTTGGTTACATTGCGGACCAGCTGGAGCAGGTCATTTTGTAAAGATGGTT 32062 || ||||| |||| | |||| || || || ||| |||| |||||||| || |||||| Sbjct 1553 GCTGAGCAGGGTTATCTGTATTGTGGCCCGGCGGGATCAGGCCATTTTGTCAAAATGGTT 1612 Query 32063 CATAATGGAATCGAATACGGAATTATGCAAGCATACGCCGAAGGATTTAACATCTTGCAC 32122 ||||| || || |||||||| || ||||| || | || ||||| ||| || || || || Sbjct 1613 CATAACGGCATTGAATACGGCATGATGCAGGCCTTTGCAGAAGGGTTTGACGTCATGTAC 1672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516442987752000