Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5134 122 1e-22 >seq5134 Length=897107 Score = 122 bits (134), Expect = 1e-22 Identities = 802/1270 (63%), Gaps = 35/1270 (3%) Strand=Plus/Minus Query 75689 GATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGT 75748 ||||| || | |||||||||| || || || || |||||||| || |||| ||| Sbjct 540403 GATCTGTTCTACGCCCTGTGGATACCCGATCTCTTTATGAAGCGCGTCGAGGCCAATGGC 540344 Query 75749 CAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAG 75808 | ||||| || | || || |||| || || || ||| | | ||| || ||| Sbjct 540343 GATTGGTCGCTCATGTGCCCCCACAAATGCCCCGGCCTTCACGATGTGTGGGGCGATGAG 540284 Query 75809 TTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCC 75868 || ||| | ||| ||||| || | |||||| | ||||| || || || | Sbjct 540283 TTCGAAAGGTTGTACGAGAAGTACGAGCAAGAGGGTCGTGCCAACCGAACGGTGA-AGGC 540225 Query 75869 GCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCT 75927 | | ||||| || || | | | ||| ||| ||||| | || || ||||| Sbjct 540224 TCAGTCCCTTTGGTTCGCCATCATTGAGGCTCAGGTGGAAACTGGGAACCCCTACATGCT 540165 Query 75928 TTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTC 75987 | ||||||||| || ||| |||||| ||||| ||||| | || || |||||| || Sbjct 540164 GTTCAAGGATGCCTGCAACCGGAAGAGCAACCAGCAGAATGTCGGCACCATCAAGTGCAG 540105 Query 75988 AAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTT 76047 || | ||||| ||||| | |||||| | ||||||| || || ||||| || Sbjct 540104 CAACTTGTGCACCGAAATCGTCGAGTACTCCTCGCCTGATGAGATTGCCGTCTGCAACTT 540045 Query 76048 GGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAA 76107 ||| || |||||||| | || ||||| |||| || | ||| | | || Sbjct 540044 GGCCTCGATCGCCCTCAATATGTTTGTCACACCCGAGAAG---ACGTATGACTTCAAGAA 539988 Query 76108 ACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTT 76167 || | ||| | || |||| || ||||||||||| ||| |||| |||| || || Sbjct 539987 GCTCAAGGAAGTTACCAAGACGGTGACCAAAAATCTCAACAAGATCATCGACATCAACTT 539928 Query 76168 TTATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTG 76226 ||||||| | ||| || ||||| || || | || | ||| | || | |||| Sbjct 539927 TTATCCCCTGCCAGA-GGCAAAGAAGTCCAACTTGAGGCATCGCCCTGTGGGCATCGGTG 539869 Query 76227 TTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCA 76286 |||| || |||| || | | ||| | || | | | | ||| || || || Sbjct 539868 TTCAGGGATTCGCTGACGCCCTGATTCTCATGCGATTCCCCTATGAAAGCGAGGAGGC-- 539811 Query 76287 AGG--AGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTG 76344 ||| |||| | || || || ||||| || ||| ||||||| || || || Sbjct 539810 AGGCCTCTTGAACCAGCAGATATTCGAGACCATCTACTACGGCGCCCTGGAAGCCAGCTG 539751 Query 76345 TGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGG 76404 ||| |||| | | |||| |||| || || | ||||| |||| | | | || Sbjct 539750 CGAACTGGCGCAGATCGAAGGACCCTACGAAACCTACGAGGGCAGCCCCGTGAGCAAGGG 539691 Query 76405 GGTGCTTCAGTTTGATATGTGGG--AAGGTG-AAACCAAGCTCAACTACGACTGGGATGT 76461 | || |||| || ||||||| |||| | ||| || || | |||||| | Sbjct 539690 AATTCTGCAGTACGACATGTGGGACAAGGAGCCAACGAATCT---GTGGGACTGGCAAAA 539634 Query 76462 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCC 76521 || ||||| ||||||| || | ||| | || ||| || | | || || ||||| Sbjct 539633 ACTGAAGGAGTCCATCAAGCAGCACGGTGTCCGGAACTCCCTGCTTGTCGCTCCCATGCC 539574 Query 76522 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAA 76581 || ||||| || || || || |||| || || |||| ||| || || ||||| ||||| Sbjct 539573 CACGGCCTCTACTGCTCAGATAATGGGCAACAACGAATCCTTCGAGCCCTACACCACAAA 539514 Query 76582 CATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAA 76641 || ||| || | || | || ||||| | || ||| | || | | | Sbjct 539513 TATTTACACCAGGCGCGTGCTGTCTGGCGAGTTCCAGGTGGTTAACCATCATTTGCTGAG 539454 Query 76642 TGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATC---TCATGGTGAAAGC 76698 ||||| | | || | | | ||| | | || |||||| | | |||| | ||| Sbjct 539453 GGACCTAACGGAGCTGGACTTGTGGGACGACGACATGAAGAACCAGATCATCTCG--AGC 539396 Query 76699 GGGTGGTTCCATTCAAAATATC---TCAGATATCCCAGATGATATCAAGAATCTCTACCG 76755 || || ||||| ||||||||| || || |||||| | | || | |||| ||| Sbjct 539395 AGG-GGCTCCATCCAAAATATCGAGTC-CATTCCCCAGAAGGT-TCGCG-ATCTGTACAA 539340 Query 76756 CACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTT 76815 || |||||||||||| | |||| |||| | |||||||||||||| ||| || Sbjct 539339 GACCGTGTGGGAAATCTCGGTGAAGTCCACCATTAAAATGGCCGCAGATCGGGGTGCGTT 539280 Query 76816 CATTGATCAAAGTCAAAGTATGAATCTATTCAT---GGAAAGTCCAACGATGTCCAAGCT 76872 ||| || || ||||| | || ||||||| | | || | || | | ||||| Sbjct 539279 CATAGACCAGAGTCAGTCGTTCAA--TATTCATGTGGCAGAGCCGAATTACG-GAAAGCT 539223 Query 76873 CTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932 | || || || | || | |||||| || |||||||| || ||||| || || || Sbjct 539222 GACGTCCATACACTTTTATTCCTGGAAAGCTGGTCTCAAAACAGGGATGTATTACCTGCG 539163 Query 76933 ATCAAAGGCG 76942 ||||| || Sbjct 539162 CACAAAGCCG 539153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596526848331040