Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_021221.1 Length=45781 Score E Sequences producing significant alignments: (Bits) Value seq3719 84.2 6e-12 >seq3719 Length=165196 Score = 84.2 bits (92), Expect = 6e-12 Identities = 183/270 (68%), Gaps = 3/270 (1%) Strand=Plus/Plus Query 1135 GTTCCCGAAGGGGGTCTATGGGCGTCTCGCTCCTCGTTCGGGGCTGGCGGTGAAACACTT 1194 |||||||| ||| ||| || || | || || || || || ||||| ||||| |||| Sbjct 79662 GTTCCCGA-GGGCTCCTACGGACGCGTGGCCCCGCGGTCCGGACTGGCCGTGAAGAACTT 79720 Query 1195 TATCGATGTGGGGGCGGGCGTGATAGACGGCGACTATCGAGGCATCGTGTGCGTGCTGCT 1254 ||||||||||| || |||||| | |||| || || || |||| | || |||| | || Sbjct 79721 CATCGATGTGGGTGCCGGCGTGGTGGACGAGGATTACCGCGGCAACCTGGGCGTTGTCCT 79780 Query 1255 GTTTAATTTCTCAGACAGCGATTACCACGTGCGGTGCGGCGATAGGGTCGTGCAATTGAT 1314 ||||||| ||| ||| || | | | ||| | ||||||| | ||| || || || Sbjct 79781 GTTTAATCACTCGGACGTGGAGTTCGAGGTGAAGCGCGGCGACCGCATCGCCCAGTTCAT 79840 Query 1315 TCTAGAAAGACACCTGAT-TGCCGATTTGCATGAGGTCGACCACCTGCGTCCGACCGAGC 1373 | || | || || | | | || || | ||| ||| | ||| ||||| | Sbjct 79841 TTGCGAGCG-CATCTTCTATCCGGAGCTGGAGTTGGTGGACAAACTGGAGGACACCGAAC 79899 Query 1374 GCGGCGACTCCGGTTTCGGTTCCACCGGCG 1403 ||||||| ||| || ||||||||||||| Sbjct 79900 GCGGCGAGAACGGATTTGGTTCCACCGGCG 79929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146367634704478