Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20takahashii_20[refseq_20GCF_5F000224235.1_202013-03-04] 5,733 sequences; 182,106,768 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq5136 84.2 3e-11 >seq5136 Length=173398 Score = 84.2 bits (92), Expect = 3e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || ||||| || ||| | || || |||||||| || || || || || || || || | Sbjct 117032 AACATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCTTGGAGGTGGAGCCT 116973 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || |||| ||| || ||||| || || || ||||| || || || || ||||| Sbjct 116972 TCCGATACGATTGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGTATTCCCCCAGAC 116913 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || || ||||||| | ||||| ||||||||||||||| Sbjct 116912 CAGCAGCGATTGATCTTCGCCGGAAAGCAGCTCGAAGAT 116874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731819552222800